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muluayele999's Projects

bertopic icon bertopic

Leveraging BERT and c-TF-IDF to create easily interpretable topics.

biolink_sdtm_owl icon biolink_sdtm_owl

An ontology for a proof of concept mapping of PKD data in the SDTM format to the Biolink Model.

biosentvec icon biosentvec

BioWordVec & BioSentVec: pre-trained embeddings for biomedical words and sentences

cancer-prediction icon cancer-prediction

CART and C4.5 decision trees, Synthetic Minority Over-sampling Techniques, and visualizations in R.

chipseq icon chipseq

ChIP-seq peak-calling, QC and differential analysis pipeline (Snakemake port of the nextflow pipeline at https://nf-co.re/chipseq).

clinical-trials icon clinical-trials

Data collection application intended for pharmaceuticals clinical trials. Contains integrated forms builder, hipaa audit log, validation testing, and mobile computing components.

clinicalbert icon clinicalbert

ClinicalBERT: Modeling Clinical Notes and Predicting Hospital Readmission (CHIL 2020 Workshop)

clinvarcaller icon clinvarcaller

Subject of my Masters Thesis, a tool designed to detect known pathogenic variants with improved sensitivity, based on the next-generation sequencing (NGS) data. Recreated, since the original one has been automatically deleted (fork from organizations repository).

clustering_iris-datasets icon clustering_iris-datasets

IRIS dataset is a in built dataset in the python or R. One of the most common and interesting dataset to explore machine learning algorithm for learning prespective. I have used clustering technique. This dataset contain 150 records with 4 variables where sepal length , sepal width , petal length & petal width are given. I have separated the datasets into two parts: One part contains Sepal's information and another part contains Petal's information. With their different length and width sizes we are trying to build clusters using k-means clustering technique.

cnn-dogbreed-classifier icon cnn-dogbreed-classifier

Built an algorithm to identify canine breed given an image of a dog. If given image of a human, the algorithm identifies a resembling dog breed.

code icon code

Compilation of R and Python programming codes

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