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btp-workshop-cancer's Introduction

BTP Cancer Genomics Workshop

Bioinformatics Training Platform (BTP) Workshop: Cancer Genomics

  • Topics
    1. NGS Quality Control
    2. Read Alignment with BWA
    3. Single Nucleotide Variant Call and Annotation
    4. Copy Number Variation
    5. Structural Variant Analysis
    6. Variants Visualization
    7. Somatic Mutation Analysis
  • Target Audience
    • Biologists
    • Non-bioinformaticians
    • Little to no programming expereience
  • Prerequisites
    • None
  • Time Required
    • 3 days
  • Compute Requirements
    • Minimum: 4 CPUs, 16GB RAM, 30GB Storage
    • Recommended: Anything > minimum

License

The contents of this repository are released under the Creative Commons Attribution 3.0 Unported License. For a summary of what this means, please see: http://creativecommons.org/licenses/by/3.0/deed.en_GB

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