This repo has been moved, please go to the EGA-archive/LocalEGA repo instead.
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License: Apache License 2.0
Please go to to https://github.com/EGA-archive/LocalEGA instead
License: Apache License 2.0
This repo has been moved, please go to the EGA-archive/LocalEGA repo instead.
As a data owner,
I want to submit the metadata describing files,
so that they are correctly annotated
Initially, the metadata will follow the current EGA standard (SRA, currently). This metadata is public. Metadata would be submitted to EGAc. Further improvements would be inherited from other tasks in WP9 and follow WP5 recommendations.
Keep track of CSC server hardware and software installation process
As an EGAl admin,
I want to control users accessing the system,
so that I can provide the expected level of access security
Local EGA administration access
I've shown the code running to Anders already.
I could create a small video (of my screen) showing the different parts and how they are connected.
Not sure it is super interesting, cuz it'll quickly become obsolete 😝
As an EGAl admin,
I want to store files in a secure way,
so that I can guarantee privacy
A Vault-like area must exist at each Local EGA
----- Should have been an Epic -----
Gör om, gör rätt
As an EGAl admin,
I want to allow particular users to submit data,
so that I can control who is submitting
In the first iteration, control of user accounts accessing the upload boxes (i.e. FTP server) must be shared with the EGAl domain, being Local, EGAc or both.
Follow the guides on the ebi-web and do a fake submission to get a better understanding of the process.
Write email to Dylan Spalding to get a test account for filling in metadata
As an EGAl admin,
I want to allow particular users to submit data,
so that I can control who is submitting
In the first iteration, control of user accounts accessing the upload boxes (i.e. FTP server) must be shared with the EGAl domain, being Local, EGAc or both.
Goal: get a feeling whether the microservice architecture is necessary.
If EGA in Spain does not run on several machines and all of it in on one only, then the microservice architecture is not fully leveraged and maybe even an overkill.
It might be useful to structure the code in replaceable or duplicable components, but if services are not scheduled on several machines, we then might implement it all with a simple thread pool.
If the argument is "We might do it in the future", then it might be the wrong argument for the current design, because we do not know the workload for the services yet. Instead, we could implement it in whatever we think will work, and adjust accordingly (or even re-implement, but then we know why) when the time comes.
As an EGAl admin,
I want to QC submitted files,
so that I can be sure that files are correct in the Archive
At iteration 1, just file md5 checking would be provided
To know more about the encryption/decryption scheme used in CRG (Barcelona)
I have started a draft diagram: https://docs.google.com/presentation/d/14L5YGrgGZVduxfmVa-gqQowBGVRwh7F2Ld4teOx5X08/edit?usp=sharing
... including errors.
Pass the debug level in the config file
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Instead of one per Spring-component...
And re-encrypt for the User.
Part of the download process for the user.
At the moment, it is just encrypted with AES (CTR mode) and a passphrase.
The passphrase is given by the user with they request the files.
Note: not good security maybe. We should also provide a way to use public/private RSA key, if the user has one. Or even GPG key.
As data owner,
I want to upload raw data files,
so that they are kept safe
Local EGA Node would provide a file transfer service (FTP, Aspera, Globus…) that will be managed outside the domain boundaries of the Local EGA solution, although linked to it.
Create demo microservice encrypting file and storing on local disk
Meeting to discuss tech.
This is the PDF version (so...without animations)
400 Gb
Guarded by AAI
...and generate its HTML version
Facing out or internal. Both.
Could be used in the submission process.
It would contain the public GPG ring for the LocalEGA node, (alternatively, just download the key from a GPG server), and offer a nice web interface (including help/explanation text) to the user.
The encryption process is hidden to the user.
The web interface could also offer a "decrypt" page, where the user is asked to input their chosen passphrase, or their RSA key in order to decrypt the files that local EGA sent.
NOTE: only interesting if the files are on the user's machine. Not suited if the files are remote.
Create a service that moves the re-encrypted files from the staging area into the vault
Just checking how they set up their message broker and are aware of some connection settings we should handle.
Draw a list of things we would like from Spain to move further
As EGAl admin,
I want ingestion errors communications,
so that errors can be corrected
Create a testsuite of some sort for the different parts?
We could have one for ingestion, one for re-encryption, etc...
Submission ID + the rest.
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