Comments (1)
Hello,
Unfortunately, we do not have the resources to support additional container systems.
If using the -D option is not sufficient, feel free to modify your local pgap.py so that it recognizes CharlieCloud; I'd start with docker_type_alternatives.
Cheers,
George Coulouris
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Related Issues (20)
- [FEATURE REQUEST] Workaround for "taskset: failed to set pid 0's affinity"-Bug HOT 2
- [BUG] Failing to run my own sequence HOT 19
- pgap --update showing huge file size during installation HOT 19
- [BUG] A YAML file argument cannot be used in combination with either the -s/--organism or -g/--genome arguments HOT 8
- [BUG] -c flag not received: /mnt/shared/scratch/theaven/uncompressed/hogenhout/pgap-s7 HOT 1
- [BUG] Fail in GenBank output file HOT 9
- product protein name issues HOT 3
- [BUG] Final process status is permanentFail HOT 1
- [Error] Docker exited with rc = 1 HOT 3
- [Error] Docker exited with rc =1 HOT 2
- Get_Proteins_app issues HOT 14
- Error: Final process status is permanentFail HOT 7
- Error: Final process status is permanentFail HOT 17
- source code for gc_get_molecules HOT 2
- PGAP for multiple users HOT 2
- ORF prediction issue HOT 3
- [BUG] Genus species requirement HOT 8
- [BUG] PGAP fails on test genome when PGAP_INPUT_DIR set to other than default HOT 4
- Species_Requirement_option HOT 1
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