Related Issues (20)
- Samplesheet description in the documentation HOT 2
- Spike ins normalization HOT 11
- Both '--read_length' and '--macs_gsize' not specified! Please specify either to infer MACS2 genome size for peak calling. HOT 1
- Error 404 for ChIP-seq assets/blacklists
- Error exit status (1) in NFCORE_CHIPSEQ:CHIPSEQ:CUSTOM_DUMPSOFTWAREVERSIONS HOT 2
- nextflow intogen.nf error: No such variable: input HOT 1
- nextflow.script.ScriptBinding.check_max() HOT 1
- MACS2 steps did not carried out HOT 2
- Provide replicate information explicitly in samplesheet HOT 5
- Header missing is in bowtie2 outputted bam files
- Problem with samplesheet HOT 3
- Process `NFCORE_CHIPSEQ:CHIPSEQ:ALIGN_BWA_MEM:BWA_MEM (EBAC_Input_REP2_T1)` terminated with an error exit status (1) HOT 3
- mergeBed ERROR: Requested column 10, but database file - only has fields 1 - 9. HOT 18
- Normalisation of bigwig files
- package or namespace load failed for ‘UpSetR’ HOT 3
- No Space left on device error HOT 3
- Make subworkflows & modules available for nf-core tools HOT 1
- Default values for p-value and FDR
- Get rid of checkIfExists for params paths
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