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nireg

Brain image registration package

nireports

The NiPreps' Reporting and Visualization system - report templates and "reportlets"

nireports-fs

Toy example of Freesurfer nireports

nirodents

nitime

Timeseries analysis for neuroscience data

nitransforms

a standalone fork of nipy/nibabel#656

niwidgets

Neuroimaging widgets for jupyter notebooks

niworkflows

Common workflows for MRI (anatomical, functional, diffusion, etc)

notebooks

random hopefully useful notebooks

notip

numba

NumPy aware dynamic Python compiler using LLVM

nvidia-docker

Build and run Docker containers leveraging NVIDIA GPUs

ohbm19

open-brain-consent

Making neuroimaging open from the grounds (consent form) and up (tools)

opendata_viz

Code behind medium blog

openfmri

code related to the OpenFMRI project

openmorph

Curated list of open-access databases with human structural MRI data

openneuro_analyses

paper-f1000_pandora_data

Article: 7-Tesla fMRI data on the perception of musical genres

parsl

Parsl - Parallel Scripting Library

participacion

pdfpc

A presenter console with multi-monitor support for PDF files.

pdfpc-latex-notes

Latex Package that allows creating a pdfpc compatible notes file directly from your latex presentation \notes.

perceptualsimilarity

LPIPS metric. pip install lpips

phantomas

Create realistic digital phantoms in diffusion MRI.

phase-based_denoising_pipeline

phys2bids

Python3 library to format physiological files in BIDS. At the moment, it supports Acqknowledge and Labchart. BrainHack participants, check the issues with the BrainHack labels!

phys2cvr

python module to compute cerebrovascular reactivity mapping and other related maps

poissonrecon

Poisson Surface Reconstruction

pomegranate

Fast, flexible and easy to use probabilistic modelling in Python.