ohsu-comp-bio Goto Github PK
Name: Oregon Health and Science University Computational Biology
Type: Organization
Location: Portland, OR
Name: Oregon Health and Science University Computational Biology
Type: Organization
Location: Portland, OR
Repository for CWL Specfications
Jsonnet documents for building a Common Workflow Language Avro protocol
Definition and DDLs for the OMOP Common Data Model (CDM)
OHSU Galaxy wrappers.
A compliance test suite for the APIs defined in the schemas repository.
Deploy Gen3 using Docker compose
A logical, reasonably standardized, but flexible project structure for doing and sharing data science work.
Code for modelling estimated deaths and cases for COVID19.
Workflow Execution Engine using WDL
cwl-tes submits your tasks to a TES server. Task submission is parallelized when possible.
Simple database APIs to manage cycIF quantification data.
Utility scripts for Cytomine
A repository for the schemas used for the data object service.
Windmill: data portal for metadata submission and query
Configuration management and related automation
Common modules for code reuse
Modules that allow the creation, download and maintenance of large portal data sets
Data portal for exploring and accessing data
Second generation of the ICGC DCC release ETL built on Spark
Importer for the ICGC "Data Repository" feature which imports file metadata from various external data repositories.
R package to infer biological activities from omics data using a collection of methods.
Snakemake decoupleR wrapper
Package to benchmark methods from decoupleR
general information about using dirac
elastic search for federated data management DEPRECATED - see intel repo
ansible configuration for GDC API based DMS
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.