onto-med/phenoman-editor

GUI to build and modify Phenotype Algorithm Specification Ontologies

phenoman-editor's Issues

Execution of search queries

Is your feature request related to a problem? Please describe.
In it's current state, the PhenoMan-Editor does only support the creation of an ontology. Search queries against an FHIR server must be written by developers (Java source code).

It would be nice to have a simple interface, where domain experts or non-developers can specify the search criteria and send the resulting query to a FHIR server. The resulting patient set should then be returned in an appropriate format.

Describe the solution you'd like
Add a new tab in the app where users can drap-and-drop phenotype classes of a loaded ontology to build a set of inclusion and exclusion criteria. There may be individual options for each phenotype class type (e.g., negation, date range in which an observation with the phenotype is located, etc.).
Patient sets could for example be provided as FHIR-JSON or CSV file.

The full list of options and export formats should be discusses in this issue.

Additional context
The PhenoMan API is able to produce images of the search queries. Maybe these images should be accessible from the GUI too?