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OpenSourceBrain's Projects

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Cortical oscillations and the basal ganglia (Fountas & Shanahan 2017)

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Electrotonic transform and EPSCs for WT and Q175+/- spiny projection neurons (Goodliffe et al 2018)

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2 Distinct Classes of L2 and L3 Pyramidal Neurons in Human Temporal Cortex (Deitcher et al 2017)

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Differential interactions between Notch and ID factors control neurogenesis (Boareto et al 2017)

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PyRhO: A multiscale optogenetics simulation platform (Evans et al 2016)

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NeuroManager: a workflow analysis based simulation management engine (Stockton & Santamaria 2015)

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Effects of Guanfacine and Phenylephrine on a model of working memory (Duggins et al 2017)

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Active dendritic integration in robust and precise grid cell firing (Schmidt-Hieber et al 2017)

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Synaptic damage underlies EEG abnormalities in postanoxic encephalopathy (Ruijter et al 2017)

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A systems model of Parkinson’s disease using biochemical systems theory (Sasidharakurup et al. 2017)

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SCZ-associated variant effects on L5 pyr cell NN activity and delta osc. (Maki-Marttunen et al 2018)

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Heterosynaptic Spike-Timing-Dependent Plasticity (Hiratani & Fukai 2017)

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Stochastic layer V pyramidal neuron: interpulse interval coding and noise (Singh & Levy 2017)

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Fast Spiking Basket cells (Tzilivaki et al 2019)

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A model of neurovascular coupling and the BOLD response (Mathias et al 2017, Kenny et al 2018)

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Striatal D1R medium spiny neuron, including a subcellular DA cascade (Lindroos et al 2018)

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State-dependent rhythmogenesis in a half-center locomotor CPG (Ausborn et al 2017)

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Perceptual judgments via sensory-motor interaction assisted by cortical GABA (Hoshino et al 2018)

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Single excitatory axons form clustered synapses onto CA1 pyramidal cell dendrites (Bloss et al 2018)

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Model of the Xenopus tadpole swimming spinal network (Roberts et al. 2014)

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Synchronized oscillations of clock gene expression in the choroid plexus (Myung et al 2018)

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Comprehensive models of human cortical pyramidal neurons (Eyal et al 2018)

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Generating neuron geometries for detailed 3D simulations using AnaMorph (Morschel et al 2017)

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Using NEURON for reaction-diffusion modeling of extracellular dynamics (Newton et al 2018)

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Neuromuscular network model of gut motility (Barth et al 2017)

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A state-space model to quantify common input to motor neurons (Feeney et al 2017)

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Morphological determinants of dendritic arborization neurons in Drosophila larva (Nanda et al 2018)

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LFP signature of monosynaptic thalamocortical connection (Hagen et al 2017)

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Short Term Depression, Presynaptic Inhib., Neuron Diversity Roles in Antennal Lobe (Wei & Lo 2020)

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Optimal synaptic assignment for locomotory behavior in C. elegans (Rakowski & Karbowski 2017)

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