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Viral Discovery Pipeline is designed to denovo assemble and align Next-Generation sequencing reads for viral discovery.

License: GNU General Public License v3.0

Dockerfile 3.83% Nextflow 81.19% Python 14.98%

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Viral Discovery Pipeline v1.0

Viral Discovery Pipeline denovo assembles and aligns Next-Generation Sequencing reads for viral discovery and outputs summary statistics.

Github Repo: https://github.com/Paul-rk-cruz/Viral_Discovery_Pipeline

Authors: Paul RK Cruz [email protected] Kate Juergens [email protected] Alex L Greninger [email protected]

Greninger Lab UW Medicine | Virology Department of Laboratory Medicine and Pathology University of Washington Created: October 12, 2021 Updated: October 12, 2021 LICENSE: GNU

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