Giter Site home page Giter Site logo

pbagos / juchmme Goto Github PK

View Code? Open in Web Editor NEW
6.0 4.0 2.0 2.18 MB

Java Utility for Class Hidden Markov Models and Extensions

Home Page: http://www.compgen.org/tools/juchmme

License: GNU General Public License v3.0

Java 94.61% Roff 5.39%
hidden-markov-models hmm semi-supervised-learning protein hidden-neural-networks biological-sequence-analysis

juchmme's People

Contributors

itamposis avatar pbagos avatar

Stargazers

 avatar  avatar  avatar  avatar  avatar

Watchers

 avatar  avatar  avatar  avatar

Forkers

neuroph12 wxyz

juchmme's Issues

Compilation error

Hello! I'm working with my groupmate at university for a statistical ML course to recreate the findings in this paper. I read the documentation, installed the required javascript dev programs on my Mac, and compiled the code using

javac -XDignore.symbol.file -sourcepath src/ -d ./bin src/hmm/Juchmme.java
javac -XDignore.symbol.file -sourcepath src/ -d ./bin src/hmm/RandomSeq.java
javac -XDignore.symbol.file -sourcepath src/ -d ./bin src/nn/Main.java.

I was getting 27 depreciation warnings and then went ahead and ran main.java to which I received -

Exception in thread "main" 
java.lang.ArrayIndexOutOfBoundsException: Index 0 out of bounds for length 0
        at nn.Main.main(Main.java:12) 

Any help would be greatly appreciated to run the code as our project deadline is approaching haha

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    ๐Ÿ–– Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. ๐Ÿ“Š๐Ÿ“ˆ๐ŸŽ‰

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google โค๏ธ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.