pen-ho/medical_knowledge_graph_app-master

医药知识图谱自动问答系统实现，包括构建知识图谱、基于知识图谱的流水线问答以及前端实现。实体识别（基于词典+BERT_CRF）、实体链接（Sentence-BERT做匹配）、意图识别（基于提问词+领域词词典）。

medical_knowledge_graph_app-master's Issues

关于问答模块

仔细看了下博主的程序，在问答这块咋跟电影相关了，看你img目录的问答反馈是对的，这是怎么回事？

想请问一下，sbert做实体链接时，symptom 、disease、drug的预向量化是通过什么方式做的？项目没发现这一步

想请问一下，sbert做实体链接时，symptom 、disease、drug的预向量化是通过什么方式做的？项目没发现这一步

AttributeError: module 'transformers' has no attribute 'AdamW'

Traceback (most recent call last):
File "C:/Users/Dell/Desktop/medical_knowledge_graph_app-master-master/med_kg/MedModel/chatbot_graph.py", line 8, in
from question_classifier import *
File "C:\Users\Dell\Desktop\medical_knowledge_graph_app-master-master\med_kg\MedModel\question_classifier.py", line 9, in
from util.nlp_ner import el
File "C:\Users\Dell\Desktop\medical_knowledge_graph_app-master-master\med_kg\util\nlp_ner.py", line 2, in
from sentence_transformers import SentenceTransformer, util
File "C:\Users\Dell.conda\envs\xt\lib\site-packages\sentence_transformers_init_.py", line 3, in
from .datasets import SentencesDataset, ParallelSentencesDataset
File "C:\Users\Dell.conda\envs\xt\lib\site-packages\sentence_transformers\datasets_init_.py", line 3, in
from .ParallelSentencesDataset import ParallelSentencesDataset
File "C:\Users\Dell.conda\envs\xt\lib\site-packages\sentence_transformers\datasets\ParallelSentencesDataset.py", line 4, in
from .. import SentenceTransformer
File "C:\Users\Dell.conda\envs\xt\lib\site-packages\sentence_transformers\SentenceTransformer.py", line 33, in
class SentenceTransformer(nn.Sequential):
File "C:\Users\Dell.conda\envs\xt\lib\site-packages\sentence_transformers\SentenceTransformer.py", line 562, in SentenceTransformer
optimizer_class: Type[Optimizer] = transformers.AdamW,
AttributeError: module 'transformers' has no attribute 'AdamW'
transformers版本都是对应的

AttributeError: module 'regex' has no attribute 'Pattern

在实体链接模块 一直报错AttributeError: module 'regex' has no attribute 'Pattern' 但是我版本都是和作者一样的 这是什么缘故呢

已解决

OSError: Model name 'med_kg/ner_model/outputs/1101medselfner-finetune/bert' was not found in model name list (bert-base-uncased, bert-large-uncased, bert-base-cased, bert-large-cased, bert-base-multilingual-uncased, bert-base-multilingual-cased, bert-base-chinese, bert-base-german-cased, bert-large-uncased-whole-word-masking, bert-large-cased-whole-word-masking, bert-large-uncased-whole-word-masking-finetuned-squad, bert-large-cased-whole-word-masking-finetuned-squad, bert-base-cased-finetuned-mrpc, bert-base-german-dbmdz-cased, bert-base-german-dbmdz-uncased). We assumed 'med_kg/ner_model/outputs/1101medselfner-finetune/bert' was a path or url to a configuration file named config.json or a directory containing such a file but couldn't find any such file at this path or url.

OSError: Model name 'med_kg/ner_model/outputs/1101medselfner-finetune/bert' was not found in model name list (bert-base-uncased, bert-large-uncased, bert-base-cased, bert-large-cased, bert-base-multilingual-uncased, bert-base-multilingual-cased, bert-base-chinese, bert-base-german-cased, bert-large-uncased-whole-word-masking, bert-large-cased-whole-word-masking, bert-large-uncased-whole-word-masking-finetuned-squad, bert-large-cased-whole-word-masking-finetuned-squad, bert-base-cased-finetuned-mrpc, bert-base-german-dbmdz-cased, bert-base-german-dbmdz-uncased). We assumed 'med_kg/ner_model/outputs/1101medselfner-finetune/bert' was a path or url to a configuration file named config.json or a directory containing such a file but couldn't find any such file at this path or url.
这个报错怎么解决，文件也解压到对应的文件夹了

想请问一下embedding的文件pkl是哪里来的呀？

请问一下，我直接执行build_medicalgraph.py，生成的图数据库结果跟README的都不一样，是哪个步骤没作好吗

图数据库边

你好，请问图数据库只有节点没有边，这是什么原因？

painful installment

有没有requestment.txt

想问一下 训练用的 tsv文件在哪里

你好，关于Medmode文件夹下的l数据集文件dataset_path = "./data/output/symptom_for_matching.txt"是怎么得到的呀？

有没有人遇到这个问题嘞：Notype object has no attribute 'run'

Find it