qianshuqinghan/cardiacperfusion

KardioPerfusion

Linux

This code has been tested with

• LinuxMint 14
• gcc 4.7.2
• Qt 4.8.4
• qwt 5.1.2
• boost 1.48.0
• zlib 1.2.5
• VTK 5.8
• ITK 4.4

Installation

Qt

You may have to install libxrender-dev first

sudo apt-get install libxrender-dev
sudo apt-get install libxext-dev

Download and extract the Qt 4.8.4 source and change to this directory

./configure
make
sudo make install

In .profile (if your shell is bash, ksh, zsh or sh), add the following lines:

PATH=/usr/local/Trolltech/Qt-4.8.4/bin:$PATH
export PATH

with

pico ~/.profile

qwt

Download and extract qwt 5.1.2 source and change to this directory

qmake
make
sudo make install

boost

You may have to install libbz2-dev, python-dev and python-bzutils first

sudo apt-get install python-dev
sudo apt-get install python-bzutils
sudo apt-get install libbz2-dev

Download and extract boost 1.48.0 source and change to this directory

./bootstrap.sh
./b2
sudo ./b2 install

zlib

Download and extract zlib 1.2.5 source. Create a build directory

mkdir binZlib
cd binZlib

You have do delete zconf.h, which will be created by cmake:

rm ../zlib-1.2.5/zconf.h

Run CMake configuration tool

ccmake ../zlib-1.2.5

Press "c" to configure and "g" for generate the Makefiles.

make 
sudo make install

VTK

You may have to install libosmesa6-dev, libgl1-mesa-dev and libst-dev

sudo apt-get install libosmesa6-dev
sudo apt-get install libgl1-mesa-dev
sudo apt-get install libxt-dev 

Download and extract vtk 5.8. source. Create a build directory

mkdir binVTK
cd binVTK

Run CMake configuration tool

ccmake ../VTK

configure ("c") and change to following options:

VTK_USE_QT                       ON
VTK_USE_QVTK_QTOPENGL            OFF

configure ("c") and generate ("g") Makefiles.

make
sudo make install

ITK

Download and extract InsightToolkit 4.4.0 source. Create a build directory

mkdir binITK
cd binITK

look for file vcl_config_compiler.h.in, and change VCL_CAN_STATIC_CONST_INIT_{FLOAT,INT} to 0 Run CMake configuration tool

ccmake ../InsightToolkit-4.4.0

configure ("c") and change the following options:

BUILD_TESTING                    OFF
ITKV3_COMPATIBILITY              ON

configure ("c") and generate ("g") Makefiles.

make
sudo make install

ITK Applications

Download and extract InsightApplications 4.2.0 source. A build is not necessary.

KardioPerfusion

Create a build directory

cd ..
mkdir binKardioPerfufion
cd binKardioPerfusion

Run Cmake configuration tool

ccmake ../KardioPerfusion

configure ("c") and check if the paths for Boost-INCLUDE_DIR, ITK_APPS, ITK_DIR, QT_QMAKE_EXECUTALBE, QWT_INCLUDE_DIR, QWT_LIBRARY_DIR and VTK_DIR are set correctly. Boost_DIR doesn't have to be set. Configure ("c") and generate ("g") Makefiles.

make

Windows

This code has been tested with

• Windows 7
• Visual Studio 10
• Qt 4.7.4
• qwt 5.1.2
• boost 1.48.0
• zlib 1.2.5
• VTK 5.8
• ITK 4.2

Installation

Qt

Download and extract the Qt 4.7.4 source. Open visual studio command prompt(on start, vs2010, menu Tools->VisaulStudio command prompt). Go to the path where Qt has been extracted, run:

configure -platform win32-msvc2010       

When it ask you opensource model, answer o, next license answer yes. After finished config,run

nmake

If you've already installed Qt-vs-addin, there will a new nemu added into the vs2010. You need config "qt options" in this menu, and set the path of Qt.

qwt

Download and extract qwt 5.1.2 source. Open the file qwt\src\qwt_valuelist.h and comment this row:

template class QWT_EXPORT QList<double>;

Open the file qwt\qwtconfig.pri and change the following lines to

#CONFIG           += debug_and_release     # release/debug/debug_and_release
CONFIG           += build_all
CONFIG           += debug_and_release     # release/debug
DEBUG_SUFFIX      = 
#CONFIG          +=QwtDll
#CONFIG     += QwtDesigner

Open qwt.pro with VS (as Qt project) and build (F5).

boost

Download and extract boost 1.48.0 AND zlib 1.2.5 source. Make sure, zconf.h is still the in zlib source directory. Go to the boost source directory and execute

bootstrap.bat
bjam.exe
bjam.exe --toolset=msvc-10.0 debug release threading=multi link=static -sNO_COMPRESSION=0 -sNO_ZLIB=0 -sZLIB_SOURCE="C:\zlib125" stage

Your path for sZLIB_SOURCE may vary.

zlib

If not done yet, download and extract zlib 1.2.5 source. Now you have to delete zconf.h. Create the project with CMake and build with VS.

VTK

Download and extract VTK 5.8 source. Run CMake, change the following options:

VTK_USE_QT                   ON
VTK_USE_QVTK_QTOPENGL        OFF

and create the project. Build with VS.

ITK

Download and extract InsightToolkit 4.2.0 source. Run CMake, change the following option:

ITKV3_COMPATIBILITY         ON

and create the project. Build with VS.

ITK Applications

Download and extract InsightApplications 4.2.0. A build is not necessary.

KardioPerfusion

Run CMake and check if the paths for Boost-INCLUDE_DIR, ITK_APPS, ITK_DIR, QT_QMAKE_EXECUTALBE, QWT_INCLUDE_DIR, QWT_LIBRARY_DIR and VTK_DIR are set correctly. Boost_DIR doesn't have to be set. Create the project. Build with VS.