Comments (4)
from mmtf.
5MOO
The structure summary is missing resolution:
http://www.rcsb.org/pdb/explore/explore.do?structureId=5MOO
from mmtf.
Biojava (SimpleMMcifConsumer class linked by @pwrose above) will use the last value encountered and that's the one written to mmtf. This is the relevant output of last mmtf files creation log:
18:30:22 [main] INFO org.rcsb.mmtf.update.BuildMmtfFiles - Processing /mnt/ftp1/pub/pdb/data/structures/divided/mmCIF/mo/5moo.cif.gz
18:30:22 [main] WARN org.biojava.nbio.structure.io.mmcif.SimpleMMcifConsumer - More than 1 resolution value present, will use last one 1.43 and discard previous 1.44
18:30:22 [main] WARN org.biojava.nbio.structure.io.mmcif.SimpleMMcifConsumer - More than 1 Rfree value present, will use last one 0.1848 and discard previous 0.16
18:30:22 [main] WARN org.biojava.nbio.structure.io.mmcif.SimpleMMcifConsumer - More than 1 R work value present, will use last one 0.1700 and discard previous 0.13
from mmtf.
OK, thanks!
from mmtf.
Related Issues (20)
- Inconsistency on whether sequenceIndexList is a required field HOT 1
- add a test file without any optional fields
- Make biological assemblies available HOT 3
- Equivalent to PDB HETATM records HOT 8
- assembly subunit ordering HOT 4
- inconsistent reduced representation of 5ijo HOT 2
- Remark/comments field HOT 15
- Clarify if bondAtomList and bondOrderList are optional for groups too HOT 5
- Bond order and aromatics/resonance HOT 13
- chainNameList, chainIdList are limited to 4 characters HOT 3
- chem_comp_type upper/lowercase? HOT 2
- [feature request] Please support the secondary structure information and other essential information supported by the pdb format HOT 2
- Make a new release HOT 7
- Chemical component identifier lost for unobserved non-standard residues HOT 2
- 5MOO has bonds between alt confs HOT 7
- Incomplete definition of the groupTypeList field HOT 2
- Generating a super cell from the mmtf. HOT 1
- Outdated atom names for some groups HOT 4
- 'RCSB restricted area' for some PDB IDs HOT 4
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