rhpvorderman Goto Github PK

acme-tiny

A tiny script to issue and renew TLS certs from Let's Encrypt

adventofcode2020

ansible

Ansible is a radically simple IT automation platform that makes your applications and systems easier to deploy. Avoid writing scripts or custom code to deploy and update your applications— automate in a language that approaches plain English, using SSH, with no agents to install on remote systems.

ansible-galaxy

An Ansible role for managing a Galaxy server

ansible-galaxy-extras

Ansible roles to configure assorted compontents for an Ubuntu VM or container configured with https://github.com/galaxyproject/ansible-galaxy with production services including nginx, uwsgi, supervisor, protftp, and slurm.

ansible-lint

Best practices checker for Ansible

ansible-role-license-changer

Add license headers to files in a directory

ansible-role-nginx

Ansible role to install and manage nginx configuration

ansible-singularity

This ansible role will install singularity from source.

apptainer.org

ascii-check

Header-only C library for ASCII string checking using various optimizations.

bcbb

Incubator for useful bioinformatics code, primarily in Python and R

benchmarksgame

Entries for the computer languages benchmark game at https://benchmarksgame-team.pages.debian.net

bioconda-recipes

Conda recipes for the bioconda channel.

bytes_sort

Example implementation for bytes sorting in CPython

conda-build

Commands and tools for building conda packages

conda-forge-admin-requests

containers

Bioinformatics containers

cpython

The Python programming language

cromwell

Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments

cromwell-feedstock

A conda-smithy repository for cromwell.

cromwell-mysql-starter

Scripts and information on starting a per user cromwell mysql database

cutadapt

cutadapt removes adapter sequences from sequencing reads

cython

The most widely used Python to C compiler

dnaio

Read and write FASTQ and FASTA

dnase-seq-pipeline

ENCODE DNase-seq pipeline

docker-galaxy-stable

:whale::bar_chart::books: Docker Images tracking the stable Galaxy releases.

docker-minimum-base

Attempt to build a smalll base for biocontainers using libc,coreutils,bash and busybox

docker_ubuntu_drmaa_conda

For building a docker image on Ubuntu with Grid Engine, DRMAA, and miniconda installed.

duc

Dude, where are my bytes: Duc, a library and suite of tools for inspecting disk usage