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followers: 2.0 following: 5.0 repos: 5.0 gists: 0.0

Name: Ricardo Fabrega

Type: User

Company: Uniformed Services University

Bio: Uniformed Services University School of Medicine Class of 2026 | Indiana University Bloomington Alumnus

Twitter: Fabregari

Location: Bethesda, MD

Ricardo Fabrega's Projects

app-shapesignature icon app-shapesignature

This App takes tract masks and convert them to series of numerical values that chracaterizes each masks. The numerical values are generated from the flattened output of 3D convolutional layers of the model trained to classify tract names. Output values could be used as a "shape signature" and compared against other similar shaped tracts.

app-tracking icon app-tracking

This service uses mrtrix 2.0 to track using three methods DTI-based Deterministic, CSD-based Probabilistic and Deterministic. It generates three separate tractograms (TCK), one for each algorithm.

app-tractanalysisprofiles icon app-tractanalysisprofiles

Create plots of diffusion metrics (i.e. FA, MD, RD, AD) for each of the segmented tracts from AFQ, known as Tract Profiles. Obtains streamline positions from segmented tracts and plots the metrics of interest along "nodes" of the tract, allowing for comparison of individual subject tracts. Requires the dt6 output from dtiinit and a white matter classification output from AFQ or WMA

docs icon docs

Brainlife Documentation

stats-k310 icon stats-k310

MatLab tutorials and examples for Class K310 Spring 2015, University of Indiana Bloomington

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