# FUNCTION -----
# substitute function
library(magrittr)
substitute_refs <- function(x, defs) {
if (is.list(x)) {
is_ref <- names(x) == "$ref"
if (any(is_ref)) {
def_location <- x[[is_ref]]
def_idx <- gsub("#/", "", def_location, fixed = TRUE) %>%
strsplit(split = "/") %>%
unlist() %>%
as.list()
replace <- purrr::pluck(defs, !!!def_idx)
if (is.null(replace)) {
cli::cli_abort(
c(x = "definition for def {.val { def_location }} returning {.var NULL} ")
)
} else {
x <- replace
}
} else {
lapply(x, substitute_refs, defs = defs)
}
} else {
x
}
}
# CREATE DIR & PATHS -----
# Create temp dir
tmp_dir <- tempdir()
schema_path <- file.path(tmp_dir, "tasks-schema.json")
json_path <- file.path(tmp_dir, "tasks.json")
# DOWNLOAD NECESSARY FILES -----
# Download file and add newline to end
download.file(
"https://raw.githubusercontent.com/Infectious-Disease-Modeling-Hubs/schemas/add-tasks-docs/tasks-schema.json",
destfile = schema_path)
write("", file = schema_path, append = TRUE)
# Download json file and add newline to end
download.file(
"https://raw.githubusercontent.com/annakrystalli/hub-infrastructure-experiments/json-schema-refs/json-schema/modified-hubmeta-examples/complex-hubmeta-mod.json",
destfile = json_path)
# SCHEMA ----
# Create schema to validate and serialise
schema <- jsonvalidate::json_schema$new(
schema = schema_path,
engine = "ajv")
# Validate unresolved json. Only 3 errors arising from unresolved pointers
schema$validate(json_path, verbose = TRUE) |>
attr("errors")
#> instancePath
#> 1 /rounds/0/model_tasks/0/task_ids/location/required
#> 2 /rounds/0/model_tasks/1/task_ids/location/required
#> 3 /rounds/1/model_tasks/0/task_ids/location/required
#> schemaPath
#> 1 #/properties/rounds/items/properties/model_tasks/items/properties/task_ids/properties/location/properties/required/type
#> 2 #/properties/rounds/items/properties/model_tasks/items/properties/task_ids/properties/location/properties/required/type
#> 3 #/properties/rounds/items/properties/model_tasks/items/properties/task_ids/properties/location/properties/required/type
#> keyword type message schema
#> 1 type array, null must be array,null array, null
#> 2 type array, null must be array,null array, null
#> 3 type array, null must be array,null array, null
#> parentSchema.description
#> 1 Array of location unique identifiers that must be present for submission to be valid. Can be null if no locations are required and all valid locations are specified in the optional property.
#> 2 Array of location unique identifiers that must be present for submission to be valid. Can be null if no locations are required and all valid locations are specified in the optional property.
#> 3 Array of location unique identifiers that must be present for submission to be valid. Can be null if no locations are required and all valid locations are specified in the optional property.
#> parentSchema.type parentSchema.type $ref
#> 1 array, null string #/$defs/task_ids/location/us_states
#> 2 array, null string #/$defs/task_ids/location/us_states
#> 3 array, null string #/$defs/task_ids/location/us_states
#> dataPath
#> 1 /rounds/0/model_tasks/0/task_ids/location/required
#> 2 /rounds/0/model_tasks/1/task_ids/location/required
#> 3 /rounds/1/model_tasks/0/task_ids/location/required
# RESOLVE POINTERS ----
# Resolve pointers manually.
json_list <- jsonlite::read_json(json_path,
simplifyVector = TRUE,
simplifyDataFrame = FALSE
)
json_resolved <- substitute_refs(json_list, json_list["$defs"])
json_resolved
#> $rounds
#> $rounds[[1]]
#> $rounds[[1]]$round_id
#> [1] "round-1"
#>
#> $rounds[[1]]$model_tasks
#> $rounds[[1]]$model_tasks[[1]]
#> $rounds[[1]]$model_tasks[[1]]$task_ids
#> $rounds[[1]]$model_tasks[[1]]$task_ids$origin_date
#> $rounds[[1]]$model_tasks[[1]]$task_ids$origin_date$required
#> [1] "2022-09-03"
#>
#> $rounds[[1]]$model_tasks[[1]]$task_ids$origin_date$optional
#> NULL
#>
#>
#> $rounds[[1]]$model_tasks[[1]]$task_ids$scenario_id
#> $rounds[[1]]$model_tasks[[1]]$task_ids$scenario_id$required
#> [1] 1
#>
#> $rounds[[1]]$model_tasks[[1]]$task_ids$scenario_id$optional
#> NULL
#>
#>
#> $rounds[[1]]$model_tasks[[1]]$task_ids$location
#> $rounds[[1]]$model_tasks[[1]]$task_ids$location$required
#> [1] "01" "02" "04" "05" "06" "08" "09" "10" "11" "12" "13" "15" "16" "17" "18"
#> [16] "19" "20" "21" "22" "23" "24" "25" "26" "27" "28" "29" "30" "31" "32" "33"
#> [31] "34" "35" "36" "37" "38" "39" "40" "41" "42" "44" "45" "46" "47" "48" "49"
#> [46] "50" "51" "53" "54" "55" "56"
#>
#> $rounds[[1]]$model_tasks[[1]]$task_ids$location$optional
#> [1] "US"
#>
#>
#> $rounds[[1]]$model_tasks[[1]]$task_ids$target
#> $rounds[[1]]$model_tasks[[1]]$task_ids$target$required
#> NULL
#>
#> $rounds[[1]]$model_tasks[[1]]$task_ids$target$optional
#> [1] "weekly rate"
#>
#>
#> $rounds[[1]]$model_tasks[[1]]$task_ids$horizon
#> $rounds[[1]]$model_tasks[[1]]$task_ids$horizon$required
#> NULL
#>
#> $rounds[[1]]$model_tasks[[1]]$task_ids$horizon$optional
#> [1] 1 2
#>
#>
#>
#> $rounds[[1]]$model_tasks[[1]]$output_types
#> $rounds[[1]]$model_tasks[[1]]$output_types$mean
#> $rounds[[1]]$model_tasks[[1]]$output_types$mean$type_id
#> [1] NA
#>
#> $rounds[[1]]$model_tasks[[1]]$output_types$mean$value
#> $rounds[[1]]$model_tasks[[1]]$output_types$mean$value$type
#> [1] "integer"
#>
#> $rounds[[1]]$model_tasks[[1]]$output_types$mean$value$minimum
#> [1] 0
#>
#>
#>
#> $rounds[[1]]$model_tasks[[1]]$output_types$quantile
#> $rounds[[1]]$model_tasks[[1]]$output_types$quantile$type_id
#> $rounds[[1]]$model_tasks[[1]]$output_types$quantile$type_id$required
#> [1] 0.25 0.50 0.75
#>
#> $rounds[[1]]$model_tasks[[1]]$output_types$quantile$type_id$optional
#> [1] 0.1 0.2 0.3 0.4 0.6 0.7 0.8 0.9
#>
#>
#> $rounds[[1]]$model_tasks[[1]]$output_types$quantile$value
#> $rounds[[1]]$model_tasks[[1]]$output_types$quantile$value$type
#> [1] "numeric"
#>
#> $rounds[[1]]$model_tasks[[1]]$output_types$quantile$value$minimum
#> [1] 0
#>
#> $rounds[[1]]$model_tasks[[1]]$output_types$quantile$value$maximum
#> [1] 1
#>
#>
#>
#> $rounds[[1]]$model_tasks[[1]]$output_types$cdf
#> $rounds[[1]]$model_tasks[[1]]$output_types$cdf$type_id
#> $rounds[[1]]$model_tasks[[1]]$output_types$cdf$type_id$required
#> [1] 10 20
#>
#> $rounds[[1]]$model_tasks[[1]]$output_types$cdf$type_id$optional
#> NULL
#>
#>
#> $rounds[[1]]$model_tasks[[1]]$output_types$cdf$value
#> $rounds[[1]]$model_tasks[[1]]$output_types$cdf$value$type
#> [1] "numeric"
#>
#> $rounds[[1]]$model_tasks[[1]]$output_types$cdf$value$minimum
#> [1] 0
#>
#> $rounds[[1]]$model_tasks[[1]]$output_types$cdf$value$maximum
#> [1] 1
#>
#>
#>
#>
#>
#> $rounds[[1]]$model_tasks[[2]]
#> $rounds[[1]]$model_tasks[[2]]$task_ids
#> $rounds[[1]]$model_tasks[[2]]$task_ids$origin_date
#> $rounds[[1]]$model_tasks[[2]]$task_ids$origin_date$required
#> [1] "2022-09-03"
#>
#> $rounds[[1]]$model_tasks[[2]]$task_ids$origin_date$optional
#> NULL
#>
#>
#> $rounds[[1]]$model_tasks[[2]]$task_ids$scenario_id
#> $rounds[[1]]$model_tasks[[2]]$task_ids$scenario_id$required
#> [1] 1
#>
#> $rounds[[1]]$model_tasks[[2]]$task_ids$scenario_id$optional
#> NULL
#>
#>
#> $rounds[[1]]$model_tasks[[2]]$task_ids$location
#> $rounds[[1]]$model_tasks[[2]]$task_ids$location$required
#> [1] "01" "02" "04" "05" "06" "08" "09" "10" "11" "12" "13" "15" "16" "17" "18"
#> [16] "19" "20" "21" "22" "23" "24" "25" "26" "27" "28" "29" "30" "31" "32" "33"
#> [31] "34" "35" "36" "37" "38" "39" "40" "41" "42" "44" "45" "46" "47" "48" "49"
#> [46] "50" "51" "53" "54" "55" "56"
#>
#> $rounds[[1]]$model_tasks[[2]]$task_ids$location$optional
#> [1] "US"
#>
#>
#> $rounds[[1]]$model_tasks[[2]]$task_ids$target
#> $rounds[[1]]$model_tasks[[2]]$task_ids$target$required
#> NULL
#>
#> $rounds[[1]]$model_tasks[[2]]$task_ids$target$optional
#> [1] "peak week"
#>
#>
#> $rounds[[1]]$model_tasks[[2]]$task_ids$horizon
#> $rounds[[1]]$model_tasks[[2]]$task_ids$horizon$required
#> NULL
#>
#> $rounds[[1]]$model_tasks[[2]]$task_ids$horizon$optional
#> [1] NA
#>
#>
#>
#> $rounds[[1]]$model_tasks[[2]]$output_types
#> $rounds[[1]]$model_tasks[[2]]$output_types$cdf
#> $rounds[[1]]$model_tasks[[2]]$output_types$cdf$type_id
#> $rounds[[1]]$model_tasks[[2]]$output_types$cdf$type_id$required
#> [1] "EW202240" "EW202241" "EW202242" "EW202243" "EW202244" "EW202245"
#> [7] "EW202246" "EW202247" "EW202248" "EW202249" "EW202250" "EW202251"
#> [13] "EW202252" "EW202301" "EW202302" "EW202303" "EW202304" "EW202305"
#> [19] "EW202306" "EW202307" "EW202308" "EW202309" "EW202310" "EW202311"
#> [25] "EW202312" "EW202313" "EW202314" "EW202315" "EW202316" "EW202317"
#> [31] "EW202318" "EW202319" "EW202320"
#>
#> $rounds[[1]]$model_tasks[[2]]$output_types$cdf$type_id$optional
#> NULL
#>
#>
#> $rounds[[1]]$model_tasks[[2]]$output_types$cdf$value
#> $rounds[[1]]$model_tasks[[2]]$output_types$cdf$value$type
#> [1] "numeric"
#>
#> $rounds[[1]]$model_tasks[[2]]$output_types$cdf$value$minimum
#> [1] 0
#>
#> $rounds[[1]]$model_tasks[[2]]$output_types$cdf$value$maximum
#> [1] 1
#>
#>
#>
#>
#>
#>
#> $rounds[[1]]$submissions_due
#> $rounds[[1]]$submissions_due$start
#> [1] "2022-09-01"
#>
#> $rounds[[1]]$submissions_due$end
#> [1] "2022-09-05"
#>
#>
#>
#> $rounds[[2]]
#> $rounds[[2]]$round_id
#> [1] "round-2"
#>
#> $rounds[[2]]$model_tasks
#> $rounds[[2]]$model_tasks[[1]]
#> $rounds[[2]]$model_tasks[[1]]$task_ids
#> $rounds[[2]]$model_tasks[[1]]$task_ids$origin_date
#> $rounds[[2]]$model_tasks[[1]]$task_ids$origin_date$required
#> [1] "2022-10-01"
#>
#> $rounds[[2]]$model_tasks[[1]]$task_ids$origin_date$optional
#> NULL
#>
#>
#> $rounds[[2]]$model_tasks[[1]]$task_ids$scenario_id
#> $rounds[[2]]$model_tasks[[1]]$task_ids$scenario_id$required
#> NULL
#>
#> $rounds[[2]]$model_tasks[[1]]$task_ids$scenario_id$optional
#> [1] 2 3
#>
#>
#> $rounds[[2]]$model_tasks[[1]]$task_ids$location
#> $rounds[[2]]$model_tasks[[1]]$task_ids$location$required
#> [1] "01" "02" "04" "05" "06" "08" "09" "10" "11" "12" "13" "15" "16" "17" "18"
#> [16] "19" "20" "21" "22" "23" "24" "25" "26" "27" "28" "29" "30" "31" "32" "33"
#> [31] "34" "35" "36" "37" "38" "39" "40" "41" "42" "44" "45" "46" "47" "48" "49"
#> [46] "50" "51" "53" "54" "55" "56"
#>
#> $rounds[[2]]$model_tasks[[1]]$task_ids$location$optional
#> [1] "US"
#>
#>
#> $rounds[[2]]$model_tasks[[1]]$task_ids$target
#> $rounds[[2]]$model_tasks[[1]]$task_ids$target$required
#> NULL
#>
#> $rounds[[2]]$model_tasks[[1]]$task_ids$target$optional
#> [1] "weekly rate"
#>
#>
#> $rounds[[2]]$model_tasks[[1]]$task_ids$age_group
#> $rounds[[2]]$model_tasks[[1]]$task_ids$age_group$required
#> NULL
#>
#> $rounds[[2]]$model_tasks[[1]]$task_ids$age_group$optional
#> [1] "0-5" "6-18" "19-24" "25-64" "65+"
#>
#>
#> $rounds[[2]]$model_tasks[[1]]$task_ids$horizon
#> $rounds[[2]]$model_tasks[[1]]$task_ids$horizon$required
#> NULL
#>
#> $rounds[[2]]$model_tasks[[1]]$task_ids$horizon$optional
#> [1] 1 2
#>
#>
#>
#> $rounds[[2]]$model_tasks[[1]]$output_types
#> $rounds[[2]]$model_tasks[[1]]$output_types$quantile
#> $rounds[[2]]$model_tasks[[1]]$output_types$quantile$type_id
#> $rounds[[2]]$model_tasks[[1]]$output_types$quantile$type_id$required
#> [1] 0.25 0.50 0.75
#>
#> $rounds[[2]]$model_tasks[[1]]$output_types$quantile$type_id$optional
#> [1] 0.1 0.2 0.3 0.4 0.6 0.7 0.8 0.9
#>
#>
#> $rounds[[2]]$model_tasks[[1]]$output_types$quantile$value
#> $rounds[[2]]$model_tasks[[1]]$output_types$quantile$value$type
#> [1] "integer"
#>
#> $rounds[[2]]$model_tasks[[1]]$output_types$quantile$value$minimum
#> [1] 0
#>
#> $rounds[[2]]$model_tasks[[1]]$output_types$quantile$value$maximum
#> [1] 1
#>
#>
#>
#>
#>
#>
#> $rounds[[2]]$submissions_due
#> $rounds[[2]]$submissions_due$start
#> [1] "2022-09-28"
#>
#> $rounds[[2]]$submissions_due$end
#> [1] "2022-10-01"
#>
#>
#> $rounds[[2]]$last_data_date
#> [1] "2022-09-30"
#>
#>
#>
#> $`$defs`
#> $`$defs`$task_ids
#> $`$defs`$task_ids$location
#> $`$defs`$task_ids$location$us_states
#> [1] "01" "02" "04" "05" "06" "08" "09" "10" "11" "12" "13" "15" "16" "17" "18"
#> [16] "19" "20" "21" "22" "23" "24" "25" "26" "27" "28" "29" "30" "31" "32" "33"
#> [31] "34" "35" "36" "37" "38" "39" "40" "41" "42" "44" "45" "46" "47" "48" "49"
#> [46] "50" "51" "53" "54" "55" "56"
# CONVERT TO JSON TO SERIALSE FOR VALIDATION
# Attempt at serialising with unboxing.
json <- json_resolved |> jsonlite::toJSON(
null = "null",
na = "string",
pretty = TRUE,
auto_unbox = TRUE
)
# All vectors serialised as arrays so generating schema errors where arrays
# expected
schema$validate(json, verbose = TRUE) |>
attr("errors")
#> instancePath
#> 1 /rounds/0/model_tasks/0/task_ids/origin_date/required
#> 2 /rounds/0/model_tasks/0/task_ids/scenario_id/required
#> 3 /rounds/0/model_tasks/0/task_ids/location/optional
#> 4 /rounds/0/model_tasks/0/task_ids/target/optional
#> 5 /rounds/0/model_tasks/0/output_types/mean/type_id
#> 6 /rounds/0/model_tasks/1/task_ids/origin_date/required
#> 7 /rounds/0/model_tasks/1/task_ids/scenario_id/required
#> 8 /rounds/0/model_tasks/1/task_ids/location/optional
#> 9 /rounds/0/model_tasks/1/task_ids/target/optional
#> 10 /rounds/0/model_tasks/1/task_ids/horizon/optional
#> 11 /rounds/1/model_tasks/0/task_ids/origin_date/required
#> 12 /rounds/1/model_tasks/0/task_ids/location/optional
#> 13 /rounds/1/model_tasks/0/task_ids/target/optional
#> schemaPath
#> 1 #/properties/rounds/items/properties/model_tasks/items/properties/task_ids/properties/origin_date/properties/required/type
#> 2 #/properties/rounds/items/properties/model_tasks/items/properties/task_ids/properties/scenario_id/properties/required/type
#> 3 #/properties/rounds/items/properties/model_tasks/items/properties/task_ids/properties/location/properties/optional/type
#> 4 #/properties/rounds/items/properties/model_tasks/items/properties/task_ids/properties/target/properties/optional/type
#> 5 #/properties/rounds/items/properties/model_tasks/items/properties/output_types/properties/mean/properties/type_id/type
#> 6 #/properties/rounds/items/properties/model_tasks/items/properties/task_ids/properties/origin_date/properties/required/type
#> 7 #/properties/rounds/items/properties/model_tasks/items/properties/task_ids/properties/scenario_id/properties/required/type
#> 8 #/properties/rounds/items/properties/model_tasks/items/properties/task_ids/properties/location/properties/optional/type
#> 9 #/properties/rounds/items/properties/model_tasks/items/properties/task_ids/properties/target/properties/optional/type
#> 10 #/properties/rounds/items/properties/model_tasks/items/properties/task_ids/properties/horizon/properties/optional/type
#> 11 #/properties/rounds/items/properties/model_tasks/items/properties/task_ids/properties/origin_date/properties/required/type
#> 12 #/properties/rounds/items/properties/model_tasks/items/properties/task_ids/properties/location/properties/optional/type
#> 13 #/properties/rounds/items/properties/model_tasks/items/properties/task_ids/properties/target/properties/optional/type
#> keyword type message schema
#> 1 type array, null must be array,null array, null
#> 2 type array, null must be array,null array, null
#> 3 type array, null must be array,null array, null
#> 4 type array, null must be array,null array, null
#> 5 type array must be array array
#> 6 type array, null must be array,null array, null
#> 7 type array, null must be array,null array, null
#> 8 type array, null must be array,null array, null
#> 9 type array, null must be array,null array, null
#> 10 type null, array must be null,array null, array
#> 11 type array, null must be array,null array, null
#> 12 type array, null must be array,null array, null
#> 13 type array, null must be array,null array, null
#> parentSchema.description
#> 1 Array of origin date unique identifiers that must be present for submission to be valid. Can be null if no origin dates are required and all valid origin dates are specified in the optional property.
#> 2 Array of identifiers of scenarios that must be present in a valid submission. Can be null if no scenario ids are required and all valid ids are specified in the optional property.
#> 3 Array of valid but not required unique location identifiers. Can be null if all locations are required and are specified in the required property.
#> 4 Array of valid but not required unique target identifiers. Can be null if all targets are required and are specified in the required property.
#> 5 Not used for mean output type. Must be an array containing the single element 'NA'.
#> 6 Array of origin date unique identifiers that must be present for submission to be valid. Can be null if no origin dates are required and all valid origin dates are specified in the optional property.
#> 7 Array of identifiers of scenarios that must be present in a valid submission. Can be null if no scenario ids are required and all valid ids are specified in the optional property.
#> 8 Array of valid but not required unique location identifiers. Can be null if all locations are required and are specified in the required property.
#> 9 Array of valid but not required unique target identifiers. Can be null if all targets are required and are specified in the required property.
#> 10 Array of valid but not required unique horizon identifiers. Can be null if all horizons are required and are specified in the required property.
#> 11 Array of origin date unique identifiers that must be present for submission to be valid. Can be null if no origin dates are required and all valid origin dates are specified in the optional property.
#> 12 Array of valid but not required unique location identifiers. Can be null if all locations are required and are specified in the required property.
#> 13 Array of valid but not required unique target identifiers. Can be null if all targets are required and are specified in the required property.
#> parentSchema.type parentSchema.items.type parentSchema.items.format
#> 1 array, null string date
#> 2 array, null integer, string <NA>
#> 3 array, null string <NA>
#> 4 array, null string <NA>
#> 5 array NULL <NA>
#> 6 array, null string date
#> 7 array, null integer, string <NA>
#> 8 array, null string <NA>
#> 9 array, null string <NA>
#> 10 null, array integer, string <NA>
#> 11 array, null string date
#> 12 array, null string <NA>
#> 13 array, null string <NA>
#> parentSchema.items.enum parentSchema.items.maxItems parentSchema.default
#> 1 NULL NA NULL
#> 2 NULL NA NULL
#> 3 NULL NA NULL
#> 4 NULL NA NULL
#> 5 NA 1 NA
#> 6 NULL NA NULL
#> 7 NULL NA NULL
#> 8 NULL NA NULL
#> 9 NULL NA NULL
#> 10 NULL NA NULL
#> 11 NULL NA NULL
#> 12 NULL NA NULL
#> 13 NULL NA NULL
#> data dataPath
#> 1 2022-09-03 /rounds/0/model_tasks/0/task_ids/origin_date/required
#> 2 1 /rounds/0/model_tasks/0/task_ids/scenario_id/required
#> 3 US /rounds/0/model_tasks/0/task_ids/location/optional
#> 4 weekly rate /rounds/0/model_tasks/0/task_ids/target/optional
#> 5 NA /rounds/0/model_tasks/0/output_types/mean/type_id
#> 6 2022-09-03 /rounds/0/model_tasks/1/task_ids/origin_date/required
#> 7 1 /rounds/0/model_tasks/1/task_ids/scenario_id/required
#> 8 US /rounds/0/model_tasks/1/task_ids/location/optional
#> 9 peak week /rounds/0/model_tasks/1/task_ids/target/optional
#> 10 NA /rounds/0/model_tasks/1/task_ids/horizon/optional
#> 11 2022-10-01 /rounds/1/model_tasks/0/task_ids/origin_date/required
#> 12 US /rounds/1/model_tasks/0/task_ids/location/optional
#> 13 weekly rate /rounds/1/model_tasks/0/task_ids/target/optional
json <- json_resolved |>
schema$serialise()
# Use Schema to validate JSON
schema$validate(json, verbose = TRUE) |>
attr("errors")
#> instancePath
#> 1 /rounds/0/model_tasks/0/task_ids/origin_date/optional
#> 2 /rounds/0/model_tasks/0/task_ids/scenario_id/optional
#> 3 /rounds/0/model_tasks/0/task_ids/target/required
#> 4 /rounds/0/model_tasks/0/task_ids/horizon/required
#> 5 /rounds/0/model_tasks/0/output_types/mean/type_id/0
#> 6 /rounds/0/model_tasks/0/output_types/cdf/type_id/optional
#> 7 /rounds/0/model_tasks/0/output_types/cdf/value/type
#> 8 /rounds/0/model_tasks/1/task_ids/origin_date/optional
#> 9 /rounds/0/model_tasks/1/task_ids/scenario_id/optional
#> 10 /rounds/0/model_tasks/1/task_ids/target/required
#> 11 /rounds/0/model_tasks/1/task_ids/horizon/required
#> 12 /rounds/0/model_tasks/1/task_ids/horizon/optional/0
#> 13 /rounds/0/model_tasks/1/output_types/cdf/type_id/optional
#> 14 /rounds/0/model_tasks/1/output_types/cdf/value/type
#> 15 /rounds/1/model_tasks/0/task_ids/origin_date/optional
#> 16 /rounds/1/model_tasks/0/task_ids/scenario_id/required
#> 17 /rounds/1/model_tasks/0/task_ids/target/required
#> 18 /rounds/1/model_tasks/0/task_ids/horizon/required
#> 19 /rounds/1/model_tasks/0/task_ids/age_group/required
#> schemaPath
#> 1 #/properties/rounds/items/properties/model_tasks/items/properties/task_ids/properties/origin_date/properties/optional/type
#> 2 #/properties/rounds/items/properties/model_tasks/items/properties/task_ids/properties/scenario_id/properties/optional/type
#> 3 #/properties/rounds/items/properties/model_tasks/items/properties/task_ids/properties/target/properties/required/type
#> 4 #/properties/rounds/items/properties/model_tasks/items/properties/task_ids/properties/horizon/properties/required/type
#> 5 #/properties/rounds/items/properties/model_tasks/items/properties/output_types/properties/mean/properties/type_id/items/enum
#> 6 #/properties/rounds/items/properties/model_tasks/items/properties/output_types/properties/cdf/properties/type_id/properties/optional/type
#> 7 #/properties/rounds/items/properties/model_tasks/items/properties/output_types/properties/cdf/properties/value/properties/type/enum
#> 8 #/properties/rounds/items/properties/model_tasks/items/properties/task_ids/properties/origin_date/properties/optional/type
#> 9 #/properties/rounds/items/properties/model_tasks/items/properties/task_ids/properties/scenario_id/properties/optional/type
#> 10 #/properties/rounds/items/properties/model_tasks/items/properties/task_ids/properties/target/properties/required/type
#> 11 #/properties/rounds/items/properties/model_tasks/items/properties/task_ids/properties/horizon/properties/required/type
#> 12 #/properties/rounds/items/properties/model_tasks/items/properties/task_ids/properties/horizon/properties/optional/items/type
#> 13 #/properties/rounds/items/properties/model_tasks/items/properties/output_types/properties/cdf/properties/type_id/properties/optional/type
#> 14 #/properties/rounds/items/properties/model_tasks/items/properties/output_types/properties/cdf/properties/value/properties/type/enum
#> 15 #/properties/rounds/items/properties/model_tasks/items/properties/task_ids/properties/origin_date/properties/optional/type
#> 16 #/properties/rounds/items/properties/model_tasks/items/properties/task_ids/properties/scenario_id/properties/required/type
#> 17 #/properties/rounds/items/properties/model_tasks/items/properties/task_ids/properties/target/properties/required/type
#> 18 #/properties/rounds/items/properties/model_tasks/items/properties/task_ids/properties/horizon/properties/required/type
#> 19 #/properties/rounds/items/properties/model_tasks/items/properties/task_ids/properties/age_group/properties/required/type
#> keyword params.type params.allowedValues
#> 1 type array, null NULL
#> 2 type null, array NULL
#> 3 type array, null NULL
#> 4 type array, null NULL
#> 5 enum NULL NA
#> 6 type array, null NULL
#> 7 enum NULL numeric, integer, double
#> 8 type array, null NULL
#> 9 type null, array NULL
#> 10 type array, null NULL
#> 11 type array, null NULL
#> 12 type integer, string NULL
#> 13 type array, null NULL
#> 14 enum NULL numeric, integer, double
#> 15 type array, null NULL
#> 16 type array, null NULL
#> 17 type array, null NULL
#> 18 type array, null NULL
#> 19 type array, null NULL
#> message schema
#> 1 must be array,null array, null
#> 2 must be null,array null, array
#> 3 must be array,null array, null
#> 4 must be array,null array, null
#> 5 must be equal to one of the allowed values NA
#> 6 must be array,null array, null
#> 7 must be equal to one of the allowed values numeric, integer, double
#> 8 must be array,null array, null
#> 9 must be null,array null, array
#> 10 must be array,null array, null
#> 11 must be array,null array, null
#> 12 must be integer,string integer, string
#> 13 must be array,null array, null
#> 14 must be equal to one of the allowed values numeric, integer, double
#> 15 must be array,null array, null
#> 16 must be array,null array, null
#> 17 must be array,null array, null
#> 18 must be array,null array, null
#> 19 must be array,null array, null
#> parentSchema.description
#> 1 Array of valid but not required unique origin date identifiers. Can be null if all origin dates are required and are specified in the required property.
#> 2 Array of identifiers of valid but not required scenarios. Can be null if all scenarios are required and are specified in the required property.
#> 3 Array of target unique identifiers that must be present for submission to be valid. Can be null if no targets are required and all valid targets are specified in the optional property.
#> 4 Array of horizon unique identifiers that must be present for submission to be valid. Can be null if no horizons are required and all valid horizons are specified in the optional property.
#> 5 <NA>
#> 6 Array of valid but not required unique target values. Can be null if all ptarget values are required and are specified in the required property.
#> 7 Data type of cumulative distribution function values.
#> 8 Array of valid but not required unique origin date identifiers. Can be null if all origin dates are required and are specified in the required property.
#> 9 Array of identifiers of valid but not required scenarios. Can be null if all scenarios are required and are specified in the required property.
#> 10 Array of target unique identifiers that must be present for submission to be valid. Can be null if no targets are required and all valid targets are specified in the optional property.
#> 11 Array of horizon unique identifiers that must be present for submission to be valid. Can be null if no horizons are required and all valid horizons are specified in the optional property.
#> 12 <NA>
#> 13 Array of valid but not required unique target values. Can be null if all ptarget values are required and are specified in the required property.
#> 14 Data type of cumulative distribution function values.
#> 15 Array of valid but not required unique origin date identifiers. Can be null if all origin dates are required and are specified in the required property.
#> 16 Array of identifiers of scenarios that must be present in a valid submission. Can be null if no scenario ids are required and all valid ids are specified in the optional property.
#> 17 Array of target unique identifiers that must be present for submission to be valid. Can be null if no targets are required and all valid targets are specified in the optional property.
#> 18 Array of horizon unique identifiers that must be present for submission to be valid. Can be null if no horizons are required and all valid horizons are specified in the optional property.
#> 19 Array of age group unique identifiers that must be present for submission to be valid. Can be null if no age groups are required and all valid age groups are specified in the optional property.
#> parentSchema.type parentSchema.items.type parentSchema.items.format
#> 1 array, null string date
#> 2 null, array integer, string <NA>
#> 3 array, null string <NA>
#> 4 array, null integer, string <NA>
#> 5 NULL NULL <NA>
#> 6 array, null NULL <NA>
#> 7 NULL NULL <NA>
#> 8 array, null string date
#> 9 null, array integer, string <NA>
#> 10 array, null string <NA>
#> 11 array, null integer, string <NA>
#> 12 integer, string NULL <NA>
#> 13 array, null NULL <NA>
#> 14 NULL NULL <NA>
#> 15 array, null string date
#> 16 array, null integer, string <NA>
#> 17 array, null string <NA>
#> 18 array, null integer, string <NA>
#> 19 array, null string <NA>
#> parentSchema.items.oneOf
#> 1 NULL
#> 2 NULL
#> 3 NULL
#> 4 NULL
#> 5 NULL
#> 6 number, string, 0, NA, NA, ^EW[0-9]{6}, NA, 8, NA, 8
#> 7 NULL
#> 8 NULL
#> 9 NULL
#> 10 NULL
#> 11 NULL
#> 12 NULL
#> 13 number, string, 0, NA, NA, ^EW[0-9]{6}, NA, 8, NA, 8
#> 14 NULL
#> 15 NULL
#> 16 NULL
#> 17 NULL
#> 18 NULL
#> 19 NULL
#> parentSchema.enum parentSchema.maxItems parentSchema.example data
#> 1 NULL NA <NA> NULL
#> 2 NULL NA <NA> NULL
#> 3 NULL NA <NA> NULL
#> 4 NULL NA <NA> NULL
#> 5 NA 1 <NA> NULL
#> 6 NULL NA <NA> NULL
#> 7 numeric, integer, double NA double numeric
#> 8 NULL NA <NA> NULL
#> 9 NULL NA <NA> NULL
#> 10 NULL NA <NA> NULL
#> 11 NULL NA <NA> NULL
#> 12 NULL NA <NA> NULL
#> 13 NULL NA <NA> NULL
#> 14 numeric, integer, double NA double numeric
#> 15 NULL NA <NA> NULL
#> 16 NULL NA <NA> NULL
#> 17 NULL NA <NA> NULL
#> 18 NULL NA <NA> NULL
#> 19 NULL NA <NA> NULL
#> dataPath
#> 1 /rounds/0/model_tasks/0/task_ids/origin_date/optional
#> 2 /rounds/0/model_tasks/0/task_ids/scenario_id/optional
#> 3 /rounds/0/model_tasks/0/task_ids/target/required
#> 4 /rounds/0/model_tasks/0/task_ids/horizon/required
#> 5 /rounds/0/model_tasks/0/output_types/mean/type_id/0
#> 6 /rounds/0/model_tasks/0/output_types/cdf/type_id/optional
#> 7 /rounds/0/model_tasks/0/output_types/cdf/value/type
#> 8 /rounds/0/model_tasks/1/task_ids/origin_date/optional
#> 9 /rounds/0/model_tasks/1/task_ids/scenario_id/optional
#> 10 /rounds/0/model_tasks/1/task_ids/target/required
#> 11 /rounds/0/model_tasks/1/task_ids/horizon/required
#> 12 /rounds/0/model_tasks/1/task_ids/horizon/optional/0
#> 13 /rounds/0/model_tasks/1/output_types/cdf/type_id/optional
#> 14 /rounds/0/model_tasks/1/output_types/cdf/value/type
#> 15 /rounds/1/model_tasks/0/task_ids/origin_date/optional
#> 16 /rounds/1/model_tasks/0/task_ids/scenario_id/required
#> 17 /rounds/1/model_tasks/0/task_ids/target/required
#> 18 /rounds/1/model_tasks/0/task_ids/horizon/required
#> 19 /rounds/1/model_tasks/0/task_ids/age_group/required
# Errors because NAs encoded as NULL whereas NULL encoded as empty.
jsonlite::prettify(json)
#> {
#> "rounds": [
#> {
#> "round_id": "round-1",
#> "model_tasks": [
#> {
#> "task_ids": {
#> "origin_date": {
#> "required": [
#> "2022-09-03"
#> ],
#> "optional": {
#>
#> }
#> },
#> "scenario_id": {
#> "required": [
#> 1
#> ],
#> "optional": {
#>
#> }
#> },
#> "location": {
#> "required": [
#> "01",
#> "02",
#> "04",
#> "05",
#> "06",
#> "08",
#> "09",
#> "10",
#> "11",
#> "12",
#> "13",
#> "15",
#> "16",
#> "17",
#> "18",
#> "19",
#> "20",
#> "21",
#> "22",
#> "23",
#> "24",
#> "25",
#> "26",
#> "27",
#> "28",
#> "29",
#> "30",
#> "31",
#> "32",
#> "33",
#> "34",
#> "35",
#> "36",
#> "37",
#> "38",
#> "39",
#> "40",
#> "41",
#> "42",
#> "44",
#> "45",
#> "46",
#> "47",
#> "48",
#> "49",
#> "50",
#> "51",
#> "53",
#> "54",
#> "55",
#> "56"
#> ],
#> "optional": [
#> "US"
#> ]
#> },
#> "target": {
#> "required": {
#>
#> },
#> "optional": [
#> "weekly rate"
#> ]
#> },
#> "horizon": {
#> "required": {
#>
#> },
#> "optional": [
#> 1,
#> 2
#> ]
#> }
#> },
#> "output_types": {
#> "mean": {
#> "type_id": [
#> null
#> ],
#> "value": {
#> "type": "integer",
#> "minimum": 0
#> }
#> },
#> "quantile": {
#> "type_id": {
#> "required": [
#> 0.25,
#> 0.5,
#> 0.75
#> ],
#> "optional": [
#> 0.1,
#> 0.2,
#> 0.3,
#> 0.4,
#> 0.6,
#> 0.7,
#> 0.8,
#> 0.9
#> ]
#> },
#> "value": {
#> "type": "numeric",
#> "minimum": 0,
#> "maximum": 1
#> }
#> },
#> "cdf": {
#> "type_id": {
#> "required": [
#> 10,
#> 20
#> ],
#> "optional": {
#>
#> }
#> },
#> "value": {
#> "type": [
#> "numeric"
#> ],
#> "minimum": 0,
#> "maximum": 1
#> }
#> }
#> }
#> },
#> {
#> "task_ids": {
#> "origin_date": {
#> "required": [
#> "2022-09-03"
#> ],
#> "optional": {
#>
#> }
#> },
#> "scenario_id": {
#> "required": [
#> 1
#> ],
#> "optional": {
#>
#> }
#> },
#> "location": {
#> "required": [
#> "01",
#> "02",
#> "04",
#> "05",
#> "06",
#> "08",
#> "09",
#> "10",
#> "11",
#> "12",
#> "13",
#> "15",
#> "16",
#> "17",
#> "18",
#> "19",
#> "20",
#> "21",
#> "22",
#> "23",
#> "24",
#> "25",
#> "26",
#> "27",
#> "28",
#> "29",
#> "30",
#> "31",
#> "32",
#> "33",
#> "34",
#> "35",
#> "36",
#> "37",
#> "38",
#> "39",
#> "40",
#> "41",
#> "42",
#> "44",
#> "45",
#> "46",
#> "47",
#> "48",
#> "49",
#> "50",
#> "51",
#> "53",
#> "54",
#> "55",
#> "56"
#> ],
#> "optional": [
#> "US"
#> ]
#> },
#> "target": {
#> "required": {
#>
#> },
#> "optional": [
#> "peak week"
#> ]
#> },
#> "horizon": {
#> "required": {
#>
#> },
#> "optional": [
#> null
#> ]
#> }
#> },
#> "output_types": {
#> "cdf": {
#> "type_id": {
#> "required": [
#> "EW202240",
#> "EW202241",
#> "EW202242",
#> "EW202243",
#> "EW202244",
#> "EW202245",
#> "EW202246",
#> "EW202247",
#> "EW202248",
#> "EW202249",
#> "EW202250",
#> "EW202251",
#> "EW202252",
#> "EW202301",
#> "EW202302",
#> "EW202303",
#> "EW202304",
#> "EW202305",
#> "EW202306",
#> "EW202307",
#> "EW202308",
#> "EW202309",
#> "EW202310",
#> "EW202311",
#> "EW202312",
#> "EW202313",
#> "EW202314",
#> "EW202315",
#> "EW202316",
#> "EW202317",
#> "EW202318",
#> "EW202319",
#> "EW202320"
#> ],
#> "optional": {
#>
#> }
#> },
#> "value": {
#> "type": [
#> "numeric"
#> ],
#> "minimum": 0,
#> "maximum": 1
#> }
#> }
#> }
#> }
#> ],
#> "submissions_due": {
#> "start": [
#> "2022-09-01"
#> ],
#> "end": [
#> "2022-09-05"
#> ]
#> }
#> },
#> {
#> "round_id": "round-2",
#> "model_tasks": [
#> {
#> "task_ids": {
#> "origin_date": {
#> "required": [
#> "2022-10-01"
#> ],
#> "optional": {
#>
#> }
#> },
#> "scenario_id": {
#> "required": {
#>
#> },
#> "optional": [
#> 2,
#> 3
#> ]
#> },
#> "location": {
#> "required": [
#> "01",
#> "02",
#> "04",
#> "05",
#> "06",
#> "08",
#> "09",
#> "10",
#> "11",
#> "12",
#> "13",
#> "15",
#> "16",
#> "17",
#> "18",
#> "19",
#> "20",
#> "21",
#> "22",
#> "23",
#> "24",
#> "25",
#> "26",
#> "27",
#> "28",
#> "29",
#> "30",
#> "31",
#> "32",
#> "33",
#> "34",
#> "35",
#> "36",
#> "37",
#> "38",
#> "39",
#> "40",
#> "41",
#> "42",
#> "44",
#> "45",
#> "46",
#> "47",
#> "48",
#> "49",
#> "50",
#> "51",
#> "53",
#> "54",
#> "55",
#> "56"
#> ],
#> "optional": [
#> "US"
#> ]
#> },
#> "target": {
#> "required": {
#>
#> },
#> "optional": [
#> "weekly rate"
#> ]
#> },
#> "age_group": {
#> "required": {
#>
#> },
#> "optional": [
#> "0-5",
#> "6-18",
#> "19-24",
#> "25-64",
#> "65+"
#> ]
#> },
#> "horizon": {
#> "required": {
#>
#> },
#> "optional": [
#> 1,
#> 2
#> ]
#> }
#> },
#> "output_types": {
#> "quantile": {
#> "type_id": {
#> "required": [
#> 0.25,
#> 0.5,
#> 0.75
#> ],
#> "optional": [
#> 0.1,
#> 0.2,
#> 0.3,
#> 0.4,
#> 0.6,
#> 0.7,
#> 0.8,
#> 0.9
#> ]
#> },
#> "value": {
#> "type": "integer",
#> "minimum": 0,
#> "maximum": 1
#> }
#> }
#> }
#> }
#> ],
#> "submissions_due": {
#> "start": [
#> "2022-09-28"
#> ],
#> "end": [
#> "2022-10-01"
#> ]
#> },
#> "last_data_date": [
#> "2022-09-30"
#> ]
#> }
#> ],
#> "$defs": {
#> "task_ids": {
#> "location": {
#> "us_states": [
#> "01",
#> "02",
#> "04",
#> "05",
#> "06",
#> "08",
#> "09",
#> "10",
#> "11",
#> "12",
#> "13",
#> "15",
#> "16",
#> "17",
#> "18",
#> "19",
#> "20",
#> "21",
#> "22",
#> "23",
#> "24",
#> "25",
#> "26",
#> "27",
#> "28",
#> "29",
#> "30",
#> "31",
#> "32",
#> "33",
#> "34",
#> "35",
#> "36",
#> "37",
#> "38",
#> "39",
#> "40",
#> "41",
#> "42",
#> "44",
#> "45",
#> "46",
#> "47",
#> "48",
#> "49",
#> "50",
#> "51",
#> "53",
#> "54",
#> "55",
#> "56"
#> ]
#> }
#> }
#> }
#> }
#> 
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