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rrbscode's Projects

2ndgs_pipelines icon 2ndgs_pipelines

Perl 5 and R source codes for next generation (the second generation) sequencing data analysis by integrating lots of open-source softwares.

gatk icon gatk

Official code repository for GATK versions 4 and up

hic-pro icon hic-pro

HiC-Pro: An optimized and flexible pipeline for Hi-C data processing

pipidabs icon pipidabs

PipiDABS: A Comprehensive and User-Friendly Pipeline for Downstream DNA Methylation Analysis of High-throughput Bisulfite Sequencing Data.

sgrna icon sgrna

Design genom-wide sgRNAs by using CRISPRseek.

softwarespipelines icon softwarespipelines

Organize various softwares for the pipelines of bioinformatics and systems biology.

top10 icon top10

Top 10 softwares of each step in bioinformatics, systems biology and computational biology.

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