Comments (4)
I have the same problem, in my case it dies at line 28...
from wtdbg2.
While performing assembly in conda environment, this was resolved.
from wtdbg2.
Can you describe the solution in more detail? I assembled it in conda environment and it still gives me the error
from wtdbg2.
Looking forward to your reply.
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Related Issues (20)
- Different contig numbers and contig length generated! HOT 1
- Died at /home/synbiolab/SoftWares/wtdbg2/wtdbg2.pl line 25. HOT 2
- No such file: assembly.events HOT 4
- No Consensus ctg.fa file created HOT 5
- Ambiguous bases HOT 1
- adjustable parameters with --load-alignments HOT 3
- Only one sample or multiple samples can be used in wtdbg2? HOT 1
- C++/ Python library HOT 1
- ".cns.fa" output HOT 1
- contigN50 too small HOT 13
- CCS data assemble far too small HOT 4
- Recomendation for AT-high and very repetitive genome
- the estimate of running time HOT 1
- Can I adjust the parameter "-l" when I use --load-alignments?
- Description in 'About' mismatch
- parameters for nanopore Q20 reads HOT 1
- Phased assembly with wtdbg2 available? HOT 1
- adjust parameters to improve assemblies.
- contig size doubled when doing local assembly HOT 1
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