Related Issues (20)
- Better control over trimming HOT 1
- SPAdes version number HOT 1
- Update STATS to include program version numbers and genome library names. HOT 1
- Add error checking for SNP and SPAdes HOT 1
- Document API for modules
- HTSEQ needs stats function.
- Integrate prnVersion() into existing modules HOT 1
- Update args processing in all modules
- BLASTDB argument processing
- PIPELINE should pull modules from file HOT 1
- Update analysis.log HOT 2
- STAR version number
- parseBlast.py needs versioning
- STATS should include the contents of sampleID.version HOT 1
- change HTSEQ version information
- TRIM version information
- Generate module-specific version numbers HOT 1
- Decouple directories and module names HOT 1
- BLAST hits not counted
- Trim location output
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