Comments (11)
@zakandrewking I really hope we are the only ones on this thread ahaha. As I told you, I'll submit this to the IP guys so that they give me the thumbs up to give it to you.
I hope you guys are doing well down there :)
-Pierre
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OK. Thanks Pierre. sounds good.
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Hi Zak,
Got the thumbs up for sharing this code. I will work a little on it so I can ensure its compatibility with the master branch. Will submit a PR soon, hopefully before I leave :)
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Excellent! Can you submit the PR against the branch called 'bigg'? Don't worry about compatibility too much—we're still changing a lot of things on that branch. But, this way, i can get your code integrated and back in the master as we finish up.
Best,
Zak
—
Sent from Mailbox
On Mon, Feb 2, 2015 at 5:49 PM, Pierre SALVY [email protected]
wrote:
Hi Zak,
Got the thumbs up for sharing this code. I will work a little on it so I can ensure its compatibility with the master branch. Will submit a PR soon, hopefully before I leave :)
Reply to this email directly or view it on GitHub:
#14 (comment)
from cobradb.
Will do.
from cobradb.
Concerning compatibility, I'll do minor modifcations to my code just to remove some useless stuff for you then, and I can help you integrate it if you want.
Are you also interested in the GPR -> reverse Polish notation -> Tree algorithm ? (note: this needs a supplementary table).
from cobradb.
Definitely! We'd love to have that.
—
Sent from Mailbox
On Tue, Feb 3, 2015 at 10:02 AM, Pierre SALVY [email protected]
wrote:
Concerning compatibility, I'll do minor modifcations to my code just to remove some useless stuff for you then, and I can help you integrate it if you want.
Are you also interested in the GPR -> reverse Polish notation -> Tree algorithm ? (note: this needs a supplementary table).
Reply to this email directly or view it on GitHub:
#14 (comment)
from cobradb.
Okay, I'll join you the code for it.
from cobradb.
Also what about domain handling and group filtering ? my actual version allows you to filter in and out reaction groups. Do you want that ? (this also needs you to have reaction groups tables, but that's pretty straightforward)
from cobradb.
No, we won't be using those features. So don't worry about them.
—
Sent from Mailbox
On Tue, Feb 3, 2015 at 10:07 AM, Pierre SALVY [email protected]
wrote:
Also what about domain handling and group filtering ? my actual version allows you to filter in and out reaction groups. Do you want that ? (this also needs you to have reaction groups tables, but that's pretty straightforward)
Reply to this email directly or view it on GitHub:
#14 (comment)
from cobradb.
I will post 3 files:
- The pull_model script that handles the heavy lifting
- The gpr_rpn_tree file that does the eval/compilation of GPRs
- browsing_tools which is a bunch of functions for interacting with the database
Since you are rewriting a lot of stuff, as agreed, you might have to go through the main script (pull_model) to glue everything together.
I will submit the PR as @Amyris.
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