seifudd Goto Github PK
Name: Fayaz Seifuddin
Type: User
Company: National, Heart, Lung and Blood Institute
Bio: Scientific Researcher / Bioinformatics Scientist
Fayaz Seifuddin's Projects
r-data-recipes
A cookbook of delectable data recipes in R.
rseqnorm
MIXnorm and SMIXnorm for FFPE RNA-seq normalization
run-leafcutter-analysis
s3fs-fuse
FUSE-based file system backed by Amazon S3
s3v2_ideas_esmp
S3norm ver2 + IDEAS epigenetic state / master peak list
s5cmd
Parallel S3 and local filesystem execution tool.
scripts
scripts
scrnaseq-analysis-notes
scRNAseq analysis notes from Ming Tang
seqqscorer
smurf-jcvi
sqanti3
Repository of SQANTI3 tool for Quality Control of Long-Read Defined Transcriptomes
sva-w
surrogate variable analysis web application
tama
Transcriptome Annotation by Modular Algorithms (for long read RNA sequencing data)
tidybulk
Brings transcriptomics to the tidyverse
tidylog
Tidylog provides feedback about dplyr and tidyr operations. It provides wrapper functions for the most common functions, such as filter, mutate, select, and group_by, and provides detailed output for joins.
transpi
TransPi – a comprehensive TRanscriptome ANalysiS PIpeline for de novo transcriptome assembly
vitae
R Markdown Résumés and CVs
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