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Demos repository how @lineupjs and @upsetjs can be used to explore Covid 19 data

Home Page: https://www.sgratzl.com/covid19_demos/

HTML 1.59% Shell 0.16% Jupyter Notebook 97.66% R 0.59%
lineup lineupjs r jupyter-lab jupyter rshiny covid-19 covid19

covid19_demos's Introduction

Covid 19 LineUp.js and UpSet.js Demos

This is a demo repository how LineUp.js and UpSet.js can be used to explore Covid 19 data.

as Websites, via Jupyter Notebooks, and R and R Shiny apps.

Jupyterlab: Open in Binder RStudio: Open in Binder

Websites

the first variant is using LineUp.js and UpSet.js as JavaScript libraries.

LineUp

LineUp Patient Data

Demo Source Code

Data

UpSet

UpSet Covid Symptoms

Demo Source Code

Jupyter Notebooks

LineUp

Not working ATM

Open in Binder

UpSet

UpSet Notebook

Open in Binder

R Studio

LineUp

LineUp Shiny App

Open in Binder

UpSet

UpSet Shiny App

Open in Binder

Data

LineUp contains one view for the patient data of South Korea: https://www.kaggle.com/kimjihoo/coronavirusdataset#PatientInfo.csv

UpSet has its data from https://github.com/hms-dbmi/upset-altair-notebook itself which are itself from https://www.nature.com/articles/d41586-020-00154-w

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