Related Issues (20)
- glMDplot changes numeric columns with NAs to character in bottom table HOT 2
- Easy way to adjust order of groups in top right plot of glMDPlot? HOT 2
- Add links to gene IDs and symbols
- Add gene list word cloud function
- Update the data table with custom zoom
- bug in glMDPlot.default: internal function make_side_main_unique() HOT 1
- glMDPlot's transform argument description needs to be changed HOT 1
- Unhelpful failure in glMDPlot when group is not a vector
- sample assignment incorrect in glMDPlot 1.8.1 vs. 1.6.0 HOT 2
- Add volcano plot wrapper HOT 1
- Allow sizes of sample expression points to change (maybe scale by sample weights)
- Multiple contrasts broken for DGELRT
- glMDPlot output empty html HOT 5
- Allow x-axis label rotation in expressions plot of MD plot
- Allow expressions to only be stored for significant genes
- Allow fixing of y-axis in expression plot of MD plot
- Values are rounded incorrectly
- glimmaMDS/glimmaMD can't find local directories HOT 1
- Specifying a second grouping as batch effect
- Toggle header for glimmaMDS depending on the gene.selection argument
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