Giter Site home page Giter Site logo

sirius-ms / sirius-libs Goto Github PK

View Code? Open in Web Editor NEW
51.0 7.0 25.0 49.28 MB

sirius-libs - Metabolomics mass spectrometry framework for molecular formula identification of small molecules written in Java

Java 96.65% MAXScript 3.32% Groovy 0.03%
java-library denovo metabolomics cheminformatics bioinformatics mass-spectrometry molecular-formulas ms-spectra ms-data scientific-computing

sirius-libs's Introduction

This repository has been archived and is no longer maintained! The SIRIUS libraries have been mode to https://github.com/sirius-ms/sirius


SIRIUS -- MS and MS/MS libraries

This repository contains the sources of all java modules/libraries needed to build the SIRIUS software including:

  • Isotope Pattern analysis
  • Fragmentation Tree computation
  • ZODIAC - Network based molecular formula ranking
  • CSI:FingerID - Fingerprint prediction
  • CSI:FingerID - Structure DB search
  • COSMIC - Confidence Score estimation
  • CANOPUS - Compound class prediction

Copyright Kai Dührkop, Markus Fleischauer, Marcus Ludwig, Martin A. Hoffman, Marvin Meusel and Sebastian Böcker, Chair of Bioinformatics, Friedrich-Schilller University Jena 2013-2020.

Licensing information are specified for each module individually. The vast majority of the modules is licensed under LGPLv3 whereas some others are licensed under GPLv3.

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. 📊📈🎉

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google ❤️ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.