Comments (3)
Will have a look tomorrow!
from rna-seq-kallisto-sleuth.
Actually, I could plot (hence the workflow would run) with just
...
fgsea:
# tool is only run if set to `true`
activate: false
# if activated, you need to provide a GMT file with gene sets of interest
gene_sets_file: "resources/gene_sets/dummy.gmt"
fdr_gene_set: 0.05
eps: 0.0
nperm: 2
spia:
....
, where '2' is here just an arbitrary number for plotting the dag.
HTH
from rna-seq-kallisto-sleuth.
Fixed in the latest release. The parameter has changed to eps though. See the updated template config.
from rna-seq-kallisto-sleuth.
Related Issues (17)
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