Comments (1)
Dear @RosaKCL
My apologies about the very late answer. I would guess the issue with the limited number of clusters was that in some way the data had such a specific structure that you had many empty clusters in the mapping?
We just added the metaclusters to the fcs files now as well, thanks for this suggestion. Note that there have been some major changes in the updates from the last months, so it might be necessary to make small adaptations in your previous script.
Kind regards,
Sofie
from flowsom.
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