Name: Susheel Bhanu Busi
Type: User
Company: UK Centre for Ecology & Hydrology
Bio: Jack of all trades, Master of none.. Interested in everything in the sun.. The `accidental bioinformatician`..
Twitter: susheelbusi
Location: United Kingdom
Blog: https://susheelbusi.netlify.app/
Susheel Bhanu Busi's Projects
Analysis of 16S sequencing data via `DADA2` using a `snakemake` workflow
Incubator for useful bioinformatics code, primarily in Python and R
lab_guidelines_repo
R scripts for performing co-occurrence analyses
Inference of microbial interaction networks from large-scale heterogeneous abundance data
Gene Set Clustering based on Functional annotation
Interactive tools for metagenome visualization and binning in R
Snakefile and scripts for running gRodon
Automated HMM creation with Uniprot sequences using Rhea or EC as clustering IDs
Folder containing config file and launcher scripts for IMP
# Kraken
An interactive course on learning genomics/bioinformatics tasks in Linux.
Course materials for NGS genomic & metagenomic course (Feb 2017)
A scalable high-throughput metabolic and biogeochemical functional trait profiler
metaG_metaT analyses for two gut microbiota profiles established by Ericsson et al. at the Mutant Mouse Resource and Research Center at the University of Missouri-Columbia (USA)
CODA microbiome-analysis using aldex2, pylofactorisation
Scripts and tutorials on how to assemble individual microbial genomes from metagenomes
Repository for presentations and network inference tutorials
Mars project exercise
Batch script for running Qiime2 all the way through to making a file for PICRUSt. Additional files for PICRUSt will be added later
Formats Roary output for viewing in FriPan
Collection of various scripts
My clone repository
Tutorial to getting started with the Snakemake workflow manager
A Snakemake Workflow for Gene Set Enrichment Analysis