This project forked from dspace/dspace
(Official) The DSpace digital asset management system that powers your Institutional Repository
Home Page: https://wiki.duraspace.org/display/DSDOC4x/Introduction
License: BSD 3-Clause "New" or "Revised" License
Blocked by https://github.com/TAMULib/tl_docker/issues/93 due to lack of dynamic eperson groups.
Research and propose an implementation for a future issue.
Unfortunately, our customizations in this file are not noted with the generally used "TAMU Customization" comment.
The purpose of this customization is to add informative language to the page when items have restricted access. When off campus, it will tell people to use VPN or a campus IP to see the bitstreams that are on-campus only. It will also provide proper messaging when bitstreams are admin only.
Check dspace/modules/xmlui-mirage2/src/main/webapp/themes/Mirage2/xsl/core/page-structure.xsl to see the custom text that gets invoked in the different cases.
Note - the language will need to be changed as well. TS does not want us relying on VPN anymore as the primary way for users to access restricted documents. So, wherever it says to use VPN, have it say instead to log in via EzProxy http://ezproxy.library.tamu.edu/login
Purpose is to enable SAGE to index these human readable comm/coll names for presentation and to provide direct access to bitstreams. Could be useful for other cases as well.
Original PR: #167
Verify functionality of a customization done for #203.
Should be done in with https://github.com/TAMULib/tl_docker/issues/69.
The default thumbnail size was enlarged some time ago. DSpace's media filter will not regenerate thumbnails if they already exist unless forced to, so the nightly job does not handles regeneration for the small legacy thumbnails. The legacy thumbnails should be either deleted or undergo a forced media filer. The small thumbnails can be tracked with this query.
Query for generated thumbnails with corresponding item and collection handles:
select b.uuid,b.size_bytes,i.uuid as itemid,ci.collection_id as collectionid,idfi.handle as item_handle,idf.handle as coll_handle,m.text_value
from bitstream b
left join metadatavalue m on m.dspace_object_id=b.uuid
left join bundle2bitstream bb on bb.bitstream_id=b.uuid
left join item2bundle ib on ib.bundle_id=bb.bundle_id
left join item i on i.uuid=ib.item_id
left join dspaceobject di on di.uuid=i.uuid
left join handle idfi on (idfi.resource_id=di.uuid and idfi.resource_type_id=2)
left join collection2item ci on ci.item_id=i.uuid
left join dspaceobject d on d.uuid=ci.collection_id
left join handle idf on (idf.resource_id=d.uuid and idf.resource_type_id=3)
where m.text_value='Generated Thumbnail' order by size_bytes asc limit 100;
Note that as DSpace is not lately able to run lengthy batch operations, individual media filter commands will need to be run serially. A handy script to do this for a list of handles can be found here: https://github.com/TAMULib/saf-scripts/blob/development/dspace/repeatcommand.sh
Required for TAMULib/dspace-angular#49
https://github.com/TAMULib/DSpace/blob/tamu-dspace-6.3/dspace/modules/additions/src/main/java/org/dspace/discovery/SolrServiceImpl.java#L1002 could potentially be enhanced to write the bitstream data.
Size this supposing that we put the Primary bitstream into its own single-value Solr field. Other files in ORIGINAL bundle would go in a multi-valued Solr field for related files. The first thumbnail in the Thumbnail bundle goes in a single-valued Solr field for thumbnails. Licenses would go in another multi-valued Solr field.
Future work will involve leveraging bitstream Name, Description.
@jcreel jcreel added the 3 label 6 hours ago
@wwelling
Needed for completion of card TAMULib/SAGE#301
Verify functionality of a customization done for #204.
Can be done with https://github.com/TAMULib/tl_docker/issues/70.
Blocks #202
org.dspace.app.xmlui.aspect.submission.submit.DescribeStep
May need to be transferred to DSpace repository or another issue be created in DSpace repository.
org.dspace.app.xmlui.aspect.administrative.metadataimport.MetadataImportConfirm
// TAMU Customization - Reload entity to avoid Hibernate no session error
org.dspace.app.xmlui.aspect.administrative.metadataimport.MetadataImportUpload
// TAMU Customization - Reload entity to avoid Hibernate no session error
This addressed a ORM session bug in DSpace 6.x. and prior that would prevent batch metadata import. Likely this has been addressed already in 7.x, but we will want to test to see if we need to bring in our fix again.
Configure and document results.
https://wiki.lyrasis.org/display/DSDOC7x/DSpace+Google+Analytics+Statistics
https://wiki.lyrasis.org/display/DSDOC7x/Submission+User+Interface#SubmissionUserInterface-OptionalSteps
https://wiki.lyrasis.org/display/DSDOC7x/Live+Import+from+external+sources
Applicable configuration files:
https://github.com/TAMULib/DSpace/blob/tamu-dspace-7_x/dspace/config/modules/external-providers.cfg
We have seen this problem prevent usage of the command-line importer and the RDF web app. It seems to occur more frequently the longer tomcat has been running. DSpace returns various 500 errors about the database connection
This was employed in 5.x and prior to ensure patrons would return to the page they were previously on after they log in (as opposed to taking them to the homepage). I believe this functionality is provided in DSpace 7, but we will need to try with Shibboleth.
Unable to submit item using standard bibliographic formats as documented.
Should be able to upload an EndNote, RIS, or BibTex file to begin a submission.
In testing on labs, uploading standard bibliographic files as documented at https://wiki.lyrasis.org/pages/viewpage.action?pageId=104566672#ImportingItemsviabasicbibliographicformats(Endnote,BibTex,RIS,CSV,etc)andonlineservices(arXiv,PubMed,CrossRef,CiNii,etc)-Submittingstartingfrombibliographicfile does not seem to populate any of the metadata. I am unable to attach test records to this note, but examples can be found on TDR by exporting citations on an item: https://dataverse.tdl.org/dataverse/tamul_dams_eval
https://wiki.lyrasis.org/display/DSDOC7x/Submission+User+Interface#SubmissionUserInterface-OptionalSteps
https://wiki.lyrasis.org/display/DSDOC7x/Live+Import+from+external+sources
Applicable configuration files:
https://github.com/TAMULib/DSpace/blob/tamu-dspace-7_x/dspace/config/modules/external-providers.cfg
This will be to update our local fork with upstream github actions.
Merging blocked by SPIKE
Find out if we have any custom email templates to port over.
From: https://github.com/TAMULib/DSpace/tree/tamu-dspace-6.3/dspace/config/emails
To: https://github.com/TAMULib/DSpace/tree/dspace-7_x-sprint2/dspace/config/emails
This is required due to the fact that the full text search results reveal partial text content of these restricted items.
dspace/modules/additions/src/main/java/org/dspace/discovery/FullTextContentStreams.java..OAKTrust customizations will need to be ported:
https://github.com/TAMULib/DSpace/blob/tamu-dspace-6.3/dspace/config/item-submission.xml
https://github.com/TAMULib/DSpace/blob/tamu-dspace-6.3/dspace/config/input-forms.xml
org.dspace.app.xmlui.cocoon.BitstreamReader
Purpose of this functionality is to add additional provenance metadata whenever a bitstream is added to an item by means of the legacy 6.x and prior REST API. The use case was when adding files with MAGPIE.
It may be better policy, however, not to add separate metadata values for each individual bitstream push. Furthermore, we will want to begin using the 7.x REST API sooner rather than later. Finally, MAGPIE is not utilizing this functionality for any customers in production at present. Let's put this one in the icebox for now.
The metadata is migrated during database migration. If we want to version the metadata customizations, we should add them to DSpace registries xml.
Login https://oaktrust.library.tamu.edu with appropriate permissions or https://labs.library.tamu.edu/dspace7 to see custom metadata registry
Identify and port custom entries to appropriate registries xml file.
This card is to align past customizations of DSpace 6 XMLUI to the current upgrade issues and subsequent PRs.
Can use GitHub CLI or https://github.com/TAMULib/DSpace/pulls?q=is%3Apr+is%3Aclosed.
Provide documentation in SharePoint.
Our existing default configuration can be found here:
https://github.com/TAMULib/DSpace/blob/tamu-dspace-6.3/dspace/config/spring/api/discovery.xml#L96
Line 96 to 229
Confirm with James, if this bean homepageConfiguration too would be required.
There are other beans present in this configuration file - that would require migration.
The patch was accepted upstream and ported to 7x.
We can remove customization #224 on upgrade to next patch release 7.6.2 when available.
When editing an item, leave the "previously published" unchecked. Later in the workflow, revisit the initial step later and check it. When proceeding with further edits, a null pointer exception is generated.
Java stacktrace: java.lang.NullPointerException
at org.dspace.content.DCDate.getYear(DCDate.java:298)
at org.dspace.app.xmlui.aspect.submission.submit.DescribeStep.renderDateField(DescribeStep.java:806)
at org.dspace.app.xmlui.aspect.submission.submit.DescribeStep.addBody(DescribeStep.java:245)
at org.dspace.app.xmlui.aspect.submission.StepTransformer.addBody(StepTransformer.java:145)
at org.dspace.app.xmlui.wing.AbstractWingTransformer.startElement(AbstractWingTransformer.java:234)...
Create a metadata fields for PDAC: name, telephone, email, affiliation, title, and UIN
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