Comments (13)
Hi @yuqiyuqitan,
Can you send us the input files? (or just some rows).
Thanks!
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sent the data to your email: [email protected]
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Hi @yuqiyuqitan,
Received I will check it asap.
Best
from cellphonedb.
Hello,
I am running into the same error. Was this issue resolved?
Thanks
from cellphonedb.
@rylanci No, I haven't received a solution.
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Hi @yuqiyuqitan,
Sorry, I forgot to check it.
I will check it this week. Sorry for the inconvenience.
Best
from cellphonedb.
Great, I would certainly be interested as well when you do identify the issue.
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Hi @yuqiyuqitan,
What R version are you using?
Best
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@mvento 3.6.1
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Ok, I will try to update it because I can't install the R dependences with R 3.4.
To resolve it faster, can you send me the csv result files of your script?
Best
from cellphonedb.
Hi,
I am getting the same errors. Any update on how to resolve the issue?
Thanks
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Ok, so in my case, the error got resolved when I mentioned which count data type I am using, by specifying the parameter, '--counts-data=gene_name'. I think by default it runs on ensemble IDs and my count matrix had genes names.
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@yuqiyuqitan
hi yuqi, I have this problem also, completely the same error output, have you solved this problem?
thanks!
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