theoreticalecology Goto Github PK

measuring-diversity-with-candy

Some materials for measuring diversity with candy

mete

Software for fitting and testing John Harte and colleagues' Maximum Entropy Theory of Ecology.

methodenseminar

molecoevol

Material for the Internship Molekulare Ökologie und Evolutionsbiologie

msc-internship-establishingnoeffect

msu_ngs2015

DE analysis module for Week3

nn_vis

An interactive visualization of neural networks

nucombog

NUCOMBog R package

outlierconf2021

⭕ Slides and hands-on codes for my talk "ggplot Wizardry: My Favorite Tricks and Secrets for Beautiful Plots in R" at the 1st OutlierConf, February 4–7 2021.

phd_planning_template

Outline for planning PhD projects

phylo-inference-ml

Inferring speciation rates and extinction rates from extant phylogenetic trees using Machine Learning

phylogenerator

Automated Phylogeny Generation for Ecologists

pichler-et-al-2019

This repository provides code and the TraitMatching package for Pichler et al. "Machine learning algorithms to infer trait-matching and predict species interactions in ecological networks"

plant

Trait-Driven Models of Ecology and Evolution :evergreen_tree:

projecttemplate

pytorch-deep-learning

Deep Learning (with PyTorch)

r3pg

An R implementation of the 3PG (Physiological Principles Predicting Growth) model

rarestabilizationdata

Strong stabilization promotes the persistence of rare species - Data chapter

rdatasets

An archive of datasets distributed with R

reprtree

Representative trees from ensembles

researchskills

Lecture notes for research skills course

rmdtemplates

R package containing a collection of Rmarkdown templates

rpreles

Simple semi-empirical model of CO2 and H20 fluxes over boreal forests

s-jsdm

Scalable joint species distribution modeling

sentinel-download

Automated download of Sentinel-2 L1C data from ESA (through wget) :http://olivierhagolle.github.io/Sentinel-download

simulate

statistics-lecture-notes-potsdam

Lecture notes from a statistics course I teach at Potsdam

targets-minimal

A minimal example data analysis project with the targets R package

testproject

Test Project for teaching Git Workflow

threepgn-package

3PGN model in fortran called from R