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bioinformatics_python_modules's Introduction

##Author: 　thippo
###E-mail:　[email protected]
###Github:　https://github.com/thippo
###Blog:　http://thippo.github.io/

  • get_fasta_dict　#处理fasta格式文件
  • multiple_replace　#对一个字符串的多个字符同时做替换
  • analyse_interposcan_result　#分析interproscan后的文件
  • get_web_content　#获取网页源文件，就是模仿浏览器的爬虫
  • find_gene_position　#查找指定区域是否在基因内以及上下游的基因
  • heatmap　#用matplotlib以DataFrame画热基图
  • figure_to_array　#将图片转换成一个三维数组
  • send_email.py　#用python发邮件
  • figure_segmentation　#图片切割
  • getORF　#最长开放阅读框
  • repeats_sequence　#指定长度序列的重复个数
  • denoise　#将矩阵中零散的点清除
  • stack_count　#计算矩阵中非1点的堆数(上下相连)
  • cosine　#计算夹角余弦
  • multiprocessing_multithreading　#多进程多线程简单用法
  • mymkdir　#新建文件夹，如已存在可选择是否删除原文件夹
  • dict_order　#字典键值排序
  • ProgressBar　#进度条
  • domain_to_ip　#域名转IP
  • ip_information　#获取IP地址的详细信息
  • link_cluster　#连接对聚类
  • youdao_tanslate_api　#有道翻译API
  • PrintColor　#linux输出带颜色的字体
  • Endput　#最后一行不换行
  • WaveSteam　#音频流
  • NonlinearRegression　#非线性回归拟合
  • ndarray_recursion　#多维数组转成字符串
  • reverse_strand　#DNA互补链
  • sizeof_fmt　#格式化文件大小
  • kzz　#可转债

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