Topic: average-nucleotide-identity Goto Github
Some thing interesting about average-nucleotide-identity
Some thing interesting about average-nucleotide-identity
average-nucleotide-identity,A Python implementation of the OrthoANI algorithm for nucleotide identity measurement.
User: althonos
average-nucleotide-identity,Cython bindings and Python interface to FastANI, a method for fast whole-genome similarity estimation.
User: althonos
average-nucleotide-identity,PyO3 bindings and Python interface to skani, a method for fast genomic identity calculation using sparse chaining.
User: althonos
average-nucleotide-identity,Fast, robust ANI and aligned fraction for (metagenomic) genomes and contigs.
User: bluenote-1577
average-nucleotide-identity,ultrafast genome querying and taxonomic profiling for metagenomic samples by abundance-corrected minhash.
User: bluenote-1577
average-nucleotide-identity,Approximate nearest neighbour search for microbial genomes based on hash metric
User: jean-pierreboth
average-nucleotide-identity,Bacterial taxonomy construction and evaluation in R
User: lmc297
average-nucleotide-identity,Rapid, in silico characterization of Bacillus cereus group isolates using WGS data
User: lmc297
average-nucleotide-identity,In silico taxonomic classification of Bacillus cereus group genomes using whole-genome sequencing data
User: lmc297
average-nucleotide-identity,Python module that provide an alternative view of the outputs produced by the software pyani
User: lucatriboli
average-nucleotide-identity,skDER: efficient & high-resolution dereplication of microbial genomes to select representatives for comparative genomics and metagenomics.
User: raufs
average-nucleotide-identity,Script for creating a tANI distance matrix for use in phylogenetic reconstruction.
User: sophiagosselin
Home Page: https://doi.org/10.1093/sysbio/syab060
average-nucleotide-identity,Application and Python module for average nucleotide identity analyses of microbes.
User: widdowquinn
Home Page: http://widdowquinn.github.io/pyani/
average-nucleotide-identity,R Code to reproduce results in the Nature Communication paper: Murray, C.S., Gao, Y. & Wu, M. Re-evaluating the evidence for a universal genetic boundary among microbial species. Nat Commun 12, 4059 (2021). https://doi.org/10.1038/s41467-021-24128-2
User: wu-lab-uva
average-nucleotide-identity,skandiver is a program for identifying mobile genetic elements (prophages, plasmids, transposases, etc.) from assembled whole genome sequences using average nucleotide identity (ANI)
User: youkaifromaccounting
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