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Tomasz Żok's Projects

jglobus icon jglobus

jGlobus is a collection of Java client libraries for Globus® Toolkit security, GRAM, and GridFTP.

maxit-docker icon maxit-docker

A Dockerfile to wrap MAXIT software to convert between PDB and PDBx/mmCIF seamlessly

mcq-clustering icon mcq-clustering

A Java project combining general and ready-to-use clustering algorithms

mcq-core icon mcq-core

A common library specific to MCQ (Mean of Circular Quantities)

mcq4structures icon mcq4structures

A parent project for a set of subprojects related to Mean of Circular Quantities (MCQ).

ngpod icon ngpod

Download the photo of the day from National Geographic and set it as the wallpaper

occupancy-splitter icon occupancy-splitter

Optimally splits PDBx/mmCIF files with RNA chains having occupancy factor less than 1.0

ring-deadlock icon ring-deadlock

Automatically exported from code.google.com/p/ring-deadlock

rna-pdb-tools icon rna-pdb-tools

🔧rna-pdb-tools: a toolbox to analyze structures and simulations of RNA - docs @ http://rna-pdb-tools.rtfd.io & tour @ http://mmagnus.github.io/rna-pdb-tools/#/

rnapolis-py icon rnapolis-py

A Python library containing RNA-related bioinformatics functions and classes.

sgd-annotator icon sgd-annotator

Annotate sequencing profiles of the S. Cerevisiae with metadata from SGD (Saccharomyces Genome Database) and Gene Ontology

taskattach icon taskattach

Provides support for attachment management for Taskwarrior

tzokcommons icon tzokcommons

A Java project with all useful utility classes, types, interfaces, etc.

udocker icon udocker

A basic user tool to execute simple docker containers in batch or interactive systems without root privileges

utilities icon utilities

Several bash utilities functions I use for everyday work

varna icon varna

Visualization Application for RNA

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