ubneutrinos/searchingfornues

Search for electron neutrinos in MicroBooNE

searchingfornues's Issues

SCE correction for MCShower and MCTrack

Figure out if this distinction between MCShower and MCTrack for the SCE correction of the start point is still correct, or if it should be removed.

https://github.com/ubneutrinos/searchingfornues/blob/develop/Selection/AnalysisTools/DefaultAnalysis_tool.cc#L591-L598

Missing pitch and nhits in the box

ShowerAnalysisTool

Store pitch value in shower analysis tool, for each plane, both with the track fitter and without the track fitter.

Store the nhits in the box for the dEdx calculation

Doxygen docs and deployment to github-pages broken

I see that there is a generateDocumentationAndDeploy.sh script and some attempt to deploy docs to github-pages, but it is not working. On https://github.com/ubneutrinos/searchingfornues under "Deployments" it shows "280 deployments" to github-pages, with the last 2 years ago, but following that link and clicking on https://ubneutrinos.github.io/searchingfornues/ results in a "404 not found" error.

It would be very helpful to new analyzers to have the documentation generated by the doxygen script, particularly for the ntuple field definitions, which otherwise need to be dug out of files such as NuMuSelection_tool.cc, DefaultAnalysis_tool.cc, CC0piNpSelection_tool.cc, etc.

Replace hardcoded PDG codes and particle masses

It would be good to replace hardcoded PDG codes and particle masses with values from ROOT table in DefaultAnalysis. E.g.:

TParticlePDG *proton = TDatabasePDG::Instance()->GetParticle(2212);
int pdg_code = proton->PdgCode();
float mass = proton->Mass();

Add Analysis tool to store "dead" regions on event-by-event basis

Store true transverse momentum

Store GENIE and flux weights for SBNFit input

We need to store the EventWeight data products for the GENIE and flux multisims. These data products are needed for systematic uncertainties evaluation and sensitivity estimate with SBNFit. Similar to what is done here: https://github.com/soleti/ElectronNeutrinoSelection/blob/74ee9476bbc76eed66cedf8937d3ea89676c0726/electronNeutrinoSelection/PandoraLEEAnalyzer_module.cc#L865

Calorimetry analysis tool nhits wrong

Instead of being 0, it is filled with 2147483648, and often it does not match the actual value.

add truth visible energy to TTree

SCE correction reco to truth

While correcting back for the SCE there is need to correct for the trigger offset, but we need to figure out the correct sign to apply to the correction

Add parent list in DefaultAnalysis

Need to add a vector of same length of PFParticle. For each PFP this vector stores the index of the mother particle in the PFP list. It stores -1 if the particle is a primary daughter of the neutrino.

Backtracked sce start x gives random values in the CalorimetryAnalysisTool

https://github.com/ubneutrinos/searchingfornues/blob/develop/Selection/AnalysisTools/CalorimetryAnalysis_tool.cc#L901

It's always 10**8 or something like that...

Store LEE weight

We need to store the MCEventWeight which corresponds to the re-scaling of the nu_E intrinsic component for the LEE unfolded signal.