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Simon Uribe-Convers's Projects

fungi_tol icon fungi_tol

Using PyPHLAWD to build a comprehensive fungal phylogeny with GenBank data

pyjanitor icon pyjanitor

Clean APIs for data cleaning. Python implementation of R package Janitor

sequence_capture_data_spring_2017 icon sequence_capture_data_spring_2017

Analyses done on sequence capture data from a Illumina HiSeq3000 and NextSeq, PE100 and PE150 respectively. The data were analyzed using the HybPiper pipeline

sondovac icon sondovac

Sondovač is a script to create orthologous low-copy nuclear probes from transcriptome and genome skim data for target enrichment. For latest version check "releases".

teaching icon teaching

scripts related to teaching biology and bioinformatics

vitis_phylogenomics icon vitis_phylogenomics

Phylogenomic analyses on the genus Vitis using SNP data. We are comparing the relationships between the wild and cultivated varieties

woodiness icon woodiness

Studying the evolution of woodiness of seed plants

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