usepa/comptox-pk-cvtdb

CompTox-PK-CvTdb

The CvTdb is a database of pharmacokinetic time-series for environmental chemicals. The database is built on a PostgreSQL server.

If you have data that you're interested in contributing to the database, please contact Risa Sayre ([email protected]), Toxicologist at the EPA and project co-owner. We suggest entering "CvT Contribution Request" in the subject line to aid us in responding to your request.

Data contributions will need to be formatted using the template "CvT_curation_template.xlsx" in this repo. Please use the Curation SOP ("CvT_Curation_SOP") as a guide for correctly extracting your data to comply with the database's standards.

Citation to the 2020 publication: Sayre, R.R., Wambaugh, J.F. & Grulke, C.M. Database of pharmacokinetic time-series data and parameters for 144 environmental chemicals. Sci Data 7, 122 (2020). https://doi.org/10.1038/s41597-020-0455-1 Files associated with the first version of the database described in the publication have been moved to the folder "archive".

comptox-pk-cvtdb's Issues

Missing values in the tk_params table foreign keys

Other fields are also missing like preferred_name in the chemicals table and title in the documents table.