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Theme for OJS 3 with Bootstrap 4

Home Page: https://uk.e-medjournal.com/index.php/psp

License: GNU General Public License v3.0

PHP 8.58% Smarty 61.45% JavaScript 9.56% Less 20.41%

oldgregg's Introduction

Old Gregg Theme for OJS 3

Information

This is a custom theme for the latest OJS 3 release. It is based on Bootstrap 4 framework and uses JATS Parser Plugin for automatic rendering of articles in JATS XML format and displaying them on article landing page.

Developer: Vitaliy Bezsheiko, MD

Live demonstration instance: https://uk.e-medjournal.com/index.php/psp

Current release

Current latest release is ready for production use

How to use

Download the plugin.
Rename directory to the oldGregg.
Copy to themes directory inside OJS.

Licensing

The oldGregg theme is licensed under GPLv3.

oldgregg's People

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oldgregg's Issues

PDF container is too narrow

Translate

Hello, there are some points that need translations.
How can I translate Latest Issues ##Plugins.Gregg.Issues.Slider.Title## in Spanish?...

Thanks

docx toxml xml file not working

docx toxml xml file not working when i use the jats theme it is working but when i try the same with oldgregg with jats xml parser on or off the abstract page is showing blank

Checkout copyright notice

PKP team had recently made changes there on the frontend:
pkp/pkp-lib#3329

Wrong menu is highlighted in Article detail page navigation menu

Following images are from oldGregg demo site.
In first image, "Introduction" is clicked; it targets "Introduction" section in the article but "Abstract" menu is highlighted.

Similarly, a menu above is wrongly selected.

Consider to shrink menu height on an article landing page

Quite reasonable in present hight it can distract users from reading the article. A javascript mechanism for reducing height while reading should be considered.

Some contents of article metadata (abstract) is visible above header

Hi @Vitaliy-1 ,
I have problem with maybe five of our articles in that some of the text of metadata (abstract) is visible above header pushing header below. Some articles without XML (abstract only) and one with XML is showing problem.
Here is the screenshot of what I mean:

Firefox inspector shows few paragraphs and part of closing tag and then ? contents of head in the body as below:

There is nothing unusual with the content of abstract:

and problem starts from the red mark

I do not have the problem with default theme:

Any idea what is going wrong here?

Best regards,
@anupent

ORCID for Authors

Hi @Vitaliy-1 ,
Can you add ORCID of authors in article detail page under Affiliations.

Further, my request is to replace "Affiliations" with "Author Details". What do you say?

Best regards,
@anupent

Dropdown menus in article detail page do not function

When I am in the article detail page, i cannot click on the drop-down menus. Other menus working fine. Again when I am in other pages like "contact", it works fine.

Enhance search page view

Several elements of the search menu are not accessible through theme template, but we can use javascript.

Article metadata of the same author switched in article details

Dear @Vitaliy-1
Strange thing happen for article metadata displayed in article details.
Please take a look this http://jurnalbeta.ac.id/index.php/betaJTM/article/view/100. The metadata (title, author, abstract, published time) is different with the title.
So is http://jurnalbeta.ac.id/index.php/betaJTM/article/view/4
The two articles have similar corresponding author. I have checked in article metadata of both articles, it is all fine. I tried using default theme, it does not have any problem with metadata displayed in article detail. So, I assume this relates to oldGregg

Middle name of author not displayed in citation style

When there is a middle name of an author, only the initial of first name is presented, initial of middle name is not shown. There should have been initials of both first and middle name in the Vancouver system.

Best regards,

Author pop-up issue in the article-detail page

It would be desirable for the author pop-up to disappear when anyone click any other part of the page. Currently, one have to click the same author again for it to disappear.

reviewing interest field missing

while registering new user, after checking reviewer role should load reviewing interest input field.

Register form cannot be submited

Reference are not visible when citations are clicked

In big screens, one expect to see the reference when s/he clicks the citation.

Currently, this is only possible if s/he has already clicked “reference” tab. Otherwise, references are not visible on clicking citations.

Main page shows articles from other journals

We run one OJS instance with several journals and only one journal currently tests now the oldGregg theme. But on the main page of this journal, we see now articles from the other journals as well. Is this reproducible?

Clicking on the article images leads to 404

Clicking on the images of the articles e.g. http://ojsdemo.e-medjournal.com/index.php/oldGregg/issue/view/1 leads to 404 error. However, clicking on the title besides works.

Add a theme menu in the dahsboard

The concept is to give the user the possibility to change some theme parameters. Need to add a menu for this first.

Add possibility to change number of latest articles

Currently, 20 latest articles are displayed on journal index page. It should be considered a mechanism that would give to the user the control of articles number to be displayed.

Search always produce "No results"

Whenever we search any items, it always produces "No results" and loads an Advanced Search Page.

If we search the same word(s) in that "Advanced Search Page", we get results.

We don't have this problem with the default theme.

"editorial team" menu takes us to a blank page

When the "editorial team" menu is clicked, it serves a blank page.

Add support for disqus plugin

ajnyga seems to have developed a few plugins among which "disqus" looks promising at the moment.

Here is the discussion thread: https://forum.pkp.sfu.ca/t/a-couple-of-plugins-to-the-plugin-gallery/39134/6

And here is the Github repo: https://github.com/ajnyga/disqus

Right now, as we activate the plugin, we do not get contents of the article in the article landing page.

##plugins.themes.PMGPTheme.no-affiliation##

If I leave the affiliation field empty then in the published article in the details I see the string ##plugins.themes.PMGPTheme.no-affiliation## which is not resolved. Google find others that have the same problem, e.g. https://jlmc.edu.np/index.php/JLMC/article/view/55#nav-details

Editorial Team and Archive Page not displayed

I installed bootstrap 4 themes today and facing two issues:
1- Editorial team page does not show board members details although these are there in Settings > Journal MASTHEAD.

2- Archive link in the menu when clicked shows a blank page.

Looking forward to your solution, please.
Nadeem

There are a couple of strange links at the top of contact pages which when clicked opens a blank page

In contact page, there are a few links at top which when clicked takes us to a blank page.

And, email address of "Principal Contact" and "Support contact" is missing.

Add support for index page in multi-journal installations

Now this page is not rendered.

Wrong "Submitted" and "Published" dates in article detail metadata.

Please look into following images for disparity in the dates:

See the published date in citation which is correct.
See the submitted date in database:

Add more information like bio-statement and ORCID to the Author pop-up in Article detail

When we click the author name in the article detail page, it pop-up author affiliation.

It would be reasonable to add information like bio-statement and ORCID of the authors.

Styles is not applied to website

I uninstalled "jatsParser plugin" and "manuscript-Jats" theme plugin. Then I copied the oldGregg folder to /plugins/themes folder and activated it in the settings - website - plugins.

When I load my homepage, styles do not seem to be applied. Below is the printscreen image:

I tried removing my custom stylesheet from public folder. Same results.
However, when I again copy manuscriptJats folder into theme, style is properly applied even if manuscriptJats them is not activated under plugins in website settings.

I am using OJS 3.1.0.1 with following server info:

list within list not displayed

Please see the code below. It used to be displayed by jatsParser before. But does not do so now.

Codes:

by jatsParser in manuscriptJats:

by oldGregg:

Footer error

Footer is not visible on the article landing page.
Also we can not add anything in the footer by editing in the settings.

Refactor JATS Parser code

Basically, want to do 2 things here:

Refuse from assigning data through setters in favor of initiating with a constructor. As those data are hardcoded in XML and we don't want to change them.
Think, it would be better to change tree-like to flat structure of section objects inside body. Just like in OOXML and LaTeX.
These modifications should be done before enriching JATS Parser Plugin with other JATS XML elements.

Add Most Read or Most Cited feature

Dear @Vitaliy-1
We are very grateful for your wonderful oldGregg.
Is there any plan for adding other features such as Most Read Most Cited in oldGregg?
A thread about this feature https://forum.pkp.sfu.ca/t/how-to-add-most-read-topics-in-ojs-3-1/36121

show email address of corresponding author

I believe email id of corresponding author is not visible now under "details" tab.
Adding this feature would be useful.

UsageStatistics in "Article full text"

Right now, we cannot see "usage statistics" info in the "article full text" page. Can we add a tab in the right side-bar named "Statistics" or anything suitable as shown in figure below.
In this figure, i have reduced the width of right side-bar and increased width of article text area.

Add support for announcement page

For now, it isn't rendered with CSS

Add logo/banner in the header

Name of the journal in the header comes from "Journal Name" in journal settings.
I did not find a way to add logo or banner. It would be reasonable to add them.

/issue/archive is empty

Hello!.
When I try to go to /issue/archive it show me an empty page. How can I fix this?.
I dont have any console log message.
I can perfectly see the different articles individualy.
PD: Beautifull theme!. Very useful.

Enrich index journal page

Consider adding information to the index journal page. Thinking about a carousel for the latest 3 issues:
https://getbootstrap.com/docs/4.0/components/carousel/#with-indicators
Maybe enclose it in the if condition to display only in case of issue image cover.
@anupent, what do you think?

Read button no redirection

on archive page after clicking Read button, it is not redirection to issue page.

Error 500 after installing

I tried to install both, master and 1.1.0.0, but it threw this expection in apache log:
PHP Fatal error: Call to undefined method OldGreggThemePlugin::addMenuArea() in /home/www/ojs/plugins/themes/oldGregg/OldGreggThemePlugin.inc.php on line 75

I'm using OJS 3.0.2.

Display journal summary on indexJournal page

As on one journal OJS installations journal summary is not displaying anywhere, it seems reasonable to add this information on index journal page.

Compliance with Smarty v3+

There should be a major upgrade for template engine in one of the future releases. Need to add compliance with latest Smarty. Related to:
pkp/pkp-lib#3242

Plugins tab hangs with message "loading"

I download from master. Named to oldGregg and copied the folder to plugins/themes.
When I went to settings - website - plugins, there is a spinning wheel with message "loading" and nothing happens.
Following is the error-log message:
"Cannot declare class ArticleSection, because the name is already in use in \plugins\themes\oldGregg\jatsParser\classes\ArticleSection.inc.php on line 14"

I get HTTP ERROR 500, when I try to see the whole article after uploading the XML [OJS 3.1.1]

There is no error if I do not upload the XML file. But if I upload the XML file, I get the error. Error log is as follows:

[17-May-2018 17:06:00 UTC] PHP Deprecated:  Methods with the same name as their class will not be constructors in a future version of PHP; Smarty has a deprecated constructor in /home/u796555399/public_html/journals/openjmri/lib/pkp/lib/vendor/smarty/smarty/libs/Smarty.class.php on line 64
[17-May-2018 17:06:00 UTC] PHP Deprecated:  Methods with the same name as their class will not be constructors in a future version of PHP; ADODB_Cache_File has a deprecated constructor in /home/u796555399/public_html/journals/openjmri/lib/pkp/lib/adodb/adodb.inc.php on line 263
[17-May-2018 17:06:00 UTC] PHP Deprecated:  Methods with the same name as their class will not be constructors in a future version of PHP; ADOConnection has a deprecated constructor in /home/u796555399/public_html/journals/openjmri/lib/pkp/lib/adodb/adodb.inc.php on line 359
[17-May-2018 17:06:00 UTC] PHP Deprecated:  Methods with the same name as their class will not be constructors in a future version of PHP; ADORecordSet has a deprecated constructor in /home/u796555399/public_html/journals/openjmri/lib/pkp/lib/adodb/adodb.inc.php on line 2921
[17-May-2018 17:06:00 UTC] PHP Deprecated:  Methods with the same name as their class will not be constructors in a future version of PHP; ADORecordSet_array has a deprecated constructor in /home/u796555399/public_html/journals/openjmri/lib/pkp/lib/adodb/adodb.inc.php on line 3939
[17-May-2018 17:06:00 UTC] PHP Warning:  Declaration of LensGalleyPlugin::register($category, $path) should be compatible with LazyLoadPlugin::register($category, $path, $mainContextId = NULL) in /home/u796555399/public_html/journals/openjmri/plugins/generic/lensGalley/LensGalleyPlugin.inc.php on line 323
[17-May-2018 17:06:00 UTC] PHP Warning:  Declaration of PKPUsageEventPlugin::getEnabled() should be compatible with LazyLoadPlugin::getEnabled($contextId = NULL) in /home/u796555399/public_html/journals/openjmri/lib/pkp/plugins/generic/usageEvent/PKPUsageEventPlugin.inc.php on line 386
[17-May-2018 17:06:00 UTC] PHP Warning:  Declaration of DRIVERDAO::setOAI(&$oai) should be compatible with PKPOAIDAO::setOAI($oai) in /home/u796555399/public_html/journals/openjmri/plugins/generic/driver/DRIVERDAO.inc.php on line 19
[17-May-2018 17:06:00 UTC] PHP Warning:  Declaration of CustomBlockPlugin::getBlockContext() should be compatible with BlockPlugin::getBlockContext($contextId = NULL) in /home/u796555399/public_html/journals/openjmri/plugins/generic/customBlockManager/CustomBlockPlugin.inc.php on line 134
[17-May-2018 17:06:00 UTC] PHP Warning:  Declaration of CustomBlockPlugin::getEnabled() should be compatible with BlockPlugin::getEnabled($contextId = NULL) in /home/u796555399/public_html/journals/openjmri/plugins/generic/customBlockManager/CustomBlockPlugin.inc.php on line 134
[17-May-2018 17:06:00 UTC] PHP Warning:  Declaration of OpenAIREDAO::setOAI(&$oai) should be compatible with PKPOAIDAO::setOAI($oai) in /home/u796555399/public_html/journals/openjmri/plugins/generic/openAIRE/OpenAIREDAO.inc.php on line 100
[17-May-2018 17:06:00 UTC] PHP Warning:  Declaration of ArticleHandler::initialize($request, $args) should be compatible with PKPHandler::initialize($request) in /home/u796555399/public_html/journals/openjmri/pages/article/ArticleHandler.inc.php on line 395
[17-May-2018 17:06:00 UTC] PHP Warning:  Declaration of SubmissionFileDAO::fromRow($row) should be compatible with PKPSubmissionFileDAO::fromRow($row, $fileImplementation) in /home/u796555399/public_html/journals/openjmri/classes/article/SubmissionFileDAO.inc.php on line 23
[17-May-2018 17:06:00 UTC] PHP Deprecated:  Non-static method PKPApplication::getCCLicenseBadge() should not be called statically in /home/u796555399/public_html/journals/openjmri/pages/article/ArticleHandler.inc.php on line 150
[17-May-2018 17:06:00 UTC] PHP Warning:  Declaration of SubmissionKeywordEntryDAO::getByControlledVocabId($controlledVocabId, $rangeInfo = NULL) should be compatible with ControlledVocabEntryDAO::getByControlledVocabId($controlledVocabId, $rangeInfo = NULL, $filter = NULL) in /home/u796555399/public_html/journals/openjmri/lib/pkp/classes/submission/SubmissionKeywordEntryDAO.inc.php on line 20
[17-May-2018 17:06:00 UTC] PHP Fatal error:  Uncaught TypeError: Return value of JATSParser\Body\Document::extractSections() must be an instance of JATSParser\Body\void, none returned in /home/u796555399/public_html/journals/openjmri/plugins/themes/oldGregg/jatsParser/src/JATSParser/Body/Document.inc.php:122
Stack trace:
#0 /home/u796555399/public_html/journals/openjmri/plugins/themes/oldGregg/jatsParser/src/JATSParser/Body/Document.inc.php(32): JATSParser\Body\Document->extractSections()
#1 /home/u796555399/public_html/journals/openjmri/plugins/themes/oldGregg/OldGreggThemePlugin.inc.php(178): JATSParser\Body\Document->__construct('/home/u79655539...')
#2 /home/u796555399/public_html/journals/openjmri/lib/pkp/classes/plugins/HookRegistry.inc.php(107): OldGreggThemePlugin->jatsParser('TemplateManager...', Array)
#3 /home/u796555399/public_html/journals/openjmri/lib/pkp/classes/template/PKPTemplateManager.inc.php(856): HookRegistry::call('TemplateManager...', Array)
#4 /home/u796555399/public_html/journals/openjmri/pages/article/ArticleHandler.inc.php(19 in /home/u796555399/public_html/journals/openjmri/plugins/themes/oldGregg/jatsParser/src/JATSParser/Body/Document.inc.php on line 122

Homepage image does not change

I am using OJS 3.1.0-1 as you suggested to me yesterday. I am facing one small issue and that is
I can not change homepage image. In fact in settings>Website>appearance, I have changed the image to be displayed but on the front end, it does not show the updated new image which is much wider to accommodate the title of my journal.
Any suggestion, how to solve this issue. You can see the output here
https://journal.seisense.com/index.php/jom

Latest issue picture is small and i want to change it to a bigger picture but all in vain...