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glnexus

Scalable gVCF merging and joint variant calling for population sequencing projects

gollum

A simple, Git-powered wiki with a sweet API and local frontend.

htslib

C library for high-throughput sequencing data formats

inherited_resources

Inherited Resources speeds up development by making your controllers inherit all restful actions so you just have to focus on what is important.

interval_notation

Ruby gem for 1D interval representation

iogen_tools

Just a network store for my work at VIGG

jspsych

A JavaScript library for creating and running behavioral experiments in a web browser

kgcourse2021

Материалы к курсу по Knowledge Graphs

learn.jquery.com

learn.jquery.com web site

learnxinyminutes-docs

Code documentation written as code! How novel and totally my idea!

lily_superenhancers

lisbon-training

Shared code for the GREEKC training-hackathon event in Lisbon, Oct 22-27, 2017

machine_learning

Machine learning library for Ruby.

macro-perfectos-ape-manual

Manual for MACRO-PERFECTOS-APE tools for P-value evaluation, motif comparison and regulatory SNP annotation

macroape

Bioinformatic tools to evaluate Jaccard similarity measure on Positional Weight Matrices (PWM), searching existing collections for occurence of motifs similar to a query and a pair of tools for simply calculating thresholds and P-values.

memo_family

memorial_data_full_db

Data on history of terror in Moscow from various projects with Memorial (full db)

milewski-ctfp-pdf

Bartosz Milewski's 'Category Theory for Programmers' unofficial PDF and LaTeX source

motif_fragility

Estimates motif (specified by PFM) fragility against certain mutational signature

motif_markup

Hackathon

myo_gesture

nested_form

Rails plugin to conveniently handle multiple models in a single form.

nested_form_deep_association_bug

network-case

oabot

Adding links to full text in Wikipedia references

paint

Implementation of basic Paint analogue with bare JS

pasio

Pasio is a tool for denoising profiles coming from DNA-sequencing data like ATAC-seq, DNA-seq or ChIP-seq.

progit2

Pro Git 2nd Edition

pwmeval

Evaluation of Binding Models based on SELEX and ChIP-seq data.

pybedtools

Python wrapper -- and more -- for Aaron Quinlan's BEDTools (bioinformatics tools)