wave-wu Goto Github PK

benchmarking-tools

Repository for the GA4GH Benchmarking Team work developing standardized benchmarking methods for germline small variant calls

cmdbtools

Command line tools for CMDB varaints browser

crispr-indels

crispresso2

Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments

deephf

Core code for the DeepHF prediction tool

doc-annovar

Documentation for the ANNOVAR software

gatk4-data-processing

Workflows for processing high-throughput sequencing data for variant discovery with GATK4 and related tools

gatk4-exome-analysis-pipeline

This WDL pipeline implements data pre-processing and initial variant calling according to the GATK Best Practices for germline SNP and Indel discovery in human exome sequencing data.

gatk4-germline-snps-indels

Workflows for germline short variant discovery with GATK4

guideseq

Analysis pipeline for the GUIDE-seq assay. For news, see:

hap.py

Haplotype VCF comparison tools

hello-world

test

indelphi-dataprocessinganalysis

Data Processing, Modeling and Analysis scripts for CRISPR-inDelphi

indelphi-model

Predictive model for CRISPR-mediated DNA repair outcomes through NHEJ/MMEJ, built with machine learning

intervar

A bioinformatics software tool for clinical interpretation of genetic variants by the 2015 ACMG-AMP guideline

ngscheckmate

Software program for checking sample matching for NGS data

selftarget

Scripts for processing and predicting CRISPR/Cas9-generated mutations

starsyi.github.com

This is my first Blog, for my study.

wsl

Issues found on WSL