whoisjack / python-bioimage-analysis-tutorial Goto Github PK
View Code? Open in Web Editor NEWA self-explanatory, hands-on intro to bioimage analysis in python. Slightly outdated but still much liked by learners.
License: MIT License
A self-explanatory, hands-on intro to bioimage analysis in python. Slightly outdated but still much liked by learners.
License: MIT License
Somehow I could not see any Figures in the notebook at
Are the URLs broken?
Thanks
A list of stuff I want to update/improve to get the tutorial back in shape.
outputs
dir and ignore everything in it with an added new .gitignore
, then change file writing funcs to write thereenvironment.yml
to facilitate install [Done; see Hackday 2021 branch]Having more engaging, and more pertinent to a wider range of biologists, would be an improvement.
We discussed possibilities including
and these various IDR datasets
It would be important to choose a dataset that either doesn't need adapting of the code or remember to adapt the code accordingly.
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