Python has become the language of choice for high-level applications where fast prototyping and efficient development are important, while glueing together low-level libraries for performance-critical tasks. The PyROOT bindings introduced ROOT into the Python arena, however, interacting with ROOT in Python should not "feel" like you are writing C++. Python also offers a multitude of powerful packages such as SciPy, NumPy, IPython, matplotlib, and PyTables, but a suitable interface between them and ROOT has been lacking.
The rootpy project is a community-driven initiative aiming to provide a more pythonic interface with ROOT on top of the existing PyROOT bindings. Several key features include:
- Improvements to help you create and manipulate trees, histograms, cuts and vectors.
- Colours and other style attributes can be referred to by descriptive strings.
Get
andSet
methods on ROOT objects are also properties.- Provides a way of mapping ROOT trees onto python objects and collections.
- Easy navigation through ROOT files. You can now access objects with
my_file.some_directory.tree_name
, for example. - Dictionaries for STL types are compiled for you automatically.
- Redirect ROOT's messages through Python's logging system.
- Optionally turn ROOT errors into Python exceptions.
- Plot your ROOT histograms or graphs with matplotlib.
- Conversion of ROOT trees into NumPy ndarrays and recarrays through the related root_numpy package. Now take advantage of the many statistical and numerical packages that Python offers (NumPy, SciPy, StatsModels, and scikit-learn).
- Conversion of ROOT files containing trees into HDF5 format with PyTables.
roosh
, a Bash-like shell environment for the ROOT filerootpy
, a command for common tasks such as summing histograms or drawing tree expressions over multiple files, listing the contents of a file, or inspecting tree branches and their sizes and types.
View the documentation at rootpy.org or (a possibly more up-to-date version) at rootpy.github.com/rootpy.
Also see an introductory presentation here: rootpy.org/intro.pdf
- Python 2.6 or 2.7 (Python 3 is currently not supported, but see this issue for progress)
- ROOT 5.28+ with PyROOT enabled
The following dependencies are optional:
- NumPy and root_numpy for speed
- matplotlib for plotting
- PyTables for HDF5 IO in rootpy.root2hdf5
- readline and termcolor for roosh
rootpy is developed and tested on Linux and Mac.
Clone the repository with git:
git clone git://github.com/rootpy/rootpy.git
or checkout with svn:
svn checkout http://svn.github.com/rootpy/rootpy
Note
svn does not checkout git submodules so you will end up with an incomplete rootpy.
If you have obtained a copy of rootpy yourself use the setup.py
script to install.
To install in your home directory:
python setup.py install --user
To install system-wide (requires root privileges):
sudo python setup.py install
To install optional requirements (matplotlib, NumPy, etc.):
pip install -U -r requirements/[roosh|array|...].txt
To install a released version of rootpy use pip.
Note
This will install the latest version of rootpy on PyPI which may be lacking many new unreleased features.
To install in your home directory:
pip install --user rootpy
To install system-wide (requires root privileges):
sudo pip install rootpy
To install optional requirements (matplotlib, NumPy, etc.):
pip install --user rootpy[array,matplotlib,...]
This requires pip version 1.1 or later.
If you installed rootpy into your home directory with the --user option
above, add ${HOME}/.local/bin
to your ${PATH}
if it is not there
already (put this in your .bashrc):
export PATH=${HOME}/.local/bin${PATH:+:$PATH}
Testing requires the nose package. Once rootpy is installed, it may be tested (from outside the source directory) by running:
nosetests --exe -v -a '!slow' rootpy
rootpy can also be tested before installing by running this from inside the source directory:
make test
Please post on the [email protected] list if you have ideas or contributions. Feel free to fork rootpy on GitHub and later submit a pull request.
See #rootpy on freenode.
IRC is banned at CERN since it reveals your hostname to people in the chatroom, making you interesting to attackers. But you can safely access it through this web link:
http://webchat.freenode.net/?randomnick=1&channels=rootpy&prompt=1
Post your questions on stackoverflow.com
and use the tag rootpy
(this tag does not exist yet, but if you have a
reputation of at least 1500 then please create it).
Think you found a bug? Open a new issue here: github.com/rootpy/rootpy/issues.
Also feel free to post questions or follow discussion on the rootpy-users or rootpy-dev Google groups.