xuelei-dai Goto Github PK
Name: Xuelei Dai
Type: User
Company: Northwest A&F University
Location: Yangling, Shaanxi 712100, China
Blog: https://scholar.google.com/citations?user=PKqy-E8AAAAJ&hl=zh-CN
Name: Xuelei Dai
Type: User
Company: Northwest A&F University
Location: Yangling, Shaanxi 712100, China
Blog: https://scholar.google.com/citations?user=PKqy-E8AAAAJ&hl=zh-CN
Fast calculation of Paterson's D (ABBA-BABA) and the f4-ratio statistics across many populations/species
Extensive de-novo TE Annotator
eQTLHap: a comprehensive eQTL analysis tool.
翻墙-科学上网
A python script for finding telomeric repeats (TTAGGG/CCCTAA) in FASTA files
De novo assembler for single molecule sequencing reads using repeat graphs
An implementation of the Grammar of Graphics in R
A fast, scalable, and accurate local ancestry method.
Pangenome graphs (review article on graph-based pangenomic methods)
Population-scale genotyping using pangenome graphs
Hierarchical Alignment Format
Combinatorial and statistical prediction of gene expression from haplotype sequence
The pipelines were built in the project resolving the genome of a diploid potato. Most of the scripts were sepcially designed to perform the analyses in the paper 'Haplotype-resolved genome analyses of a heterozygous diploid potato' (under review).
HiC-Pro: An optimized and flexible pipeline for Hi-C data processing
“When everything is connected to everything else, for better or worse, everything matters.” Bruce Mau
Hifiasm: a haplotype-resolved assembler for accurate Hifi reads
IsoSeq3 - Scalable De Novo Isoform Discovery from Single-Molecule PacBio Reads
Documentation and Developers Code Base for Iso-Seq SMRTAnalysis 3.x and beyond
Python utility libraries on genome assembly, annotation and comparative genomics
Visualization and analysis software for Hi-C data -
A One-Click System for Analyzing Loop-Resolution Hi-C Experiments
linux command
A software package for local ancestry inference and haplotype phasing
lumpy: a general probabilistic framework for structural variant discovery
Fully automated generation of UCSC assembly hubs
Structural variant and indel caller for mapped sequencing data
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.