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Yifang Tan's Projects

samtools icon samtools

Tools (written in C using htslib) for manipulating next-generation sequencing data

singlecellpcaplot icon singlecellpcaplot

SingleCellPCAplot is an R script for the principal component analysis of single cell RNAseq data. The script will take as an input the processed mastertable with RPKM values and perform a PCA clustering and highlight in a gradient scale the expression of the gene of interest (provided as the first argument).

ssw icon ssw

striped smith waterman implementation

thulac icon thulac

An Efficient Lexical Analyzer for Chinese

wtmmap icon wtmmap

C wavelet tree implementation with fast loading times

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