yrm9837/mzmd-java

System requirements:

• Build-time: Java 8 JDK, Apache Maven
• Runtime: Java 8 JRE or higher

msDataServer Web API

###HTTP GET /api/v2/filestatus

Checks the status of the server's open-file process. Returns additional file data if a file has been loaded and data model is ready..

####Server response:

HTTP 200 (OK): File has been loaded and ata model is ready, begin querying for points.
	Payload: { "mzmin" : float, "mzmax" : float, "rtmin" : float, "rtmax" : float, "intmin" : float, "intmax" : float, "pointcount": integer, "progress": float }
HTTP 204 (No Content): No file has been selected, open a file before continuing.
HTTP 400 (Bad Request): Malformed request (usually a missing parameter)
HTTP 403 (Forbidden): The file is currently being selected
HTTP 406 (Not Acceptable): The selected file is of the wrong file format, reselect file before continuing.
HTTP 409 (Conflict): The server is selecting a file or processing the selected file. Continue checking file status.

###HTTP GET /api/v2/getpoints

Queries the database for points to display on the graph. Requests a specific number of points within the given bounds. Server determines the detail level that would provide the same or more points than requested and samples this set to the requested number of points.

####URL parameters:

mzmin (double): mz lower bound (0 for global mz minimum)
mzmax (double): mz upper bound (0 for global mz maximum)
rtmin (float): rt lower bound (0 for global rt minimum)
rtmax (float): rt upper bound (0 for global rt maximum)
m (int): the number of points on mz axis (0 for no limit)
n (int): the number of points on rt axis (0 for no limit)

####Server response:

HTTP 200 (OK): Query successfully serviced, returning points.
	Payload: [[<pointId>,<traceId>,<mz>,<rt>,<intensity>], ... ]
HTTP 204 (No Content): No file has been selected, open a file before continuing.
HTTP 400 (Bad Request): Malformed request, missing parameter or invalid query range (i.e. mzmin > mzmax).
HTTP 406 (Not Acceptable): The previously selected file is of the wrong file format, reselect file before continuing.
HTTP 409 (Conflict): The server is selecting a file or processing the selected file. Continue checking file status.