zachary-foster Goto Github PK

.dotfiles

Configuration for software, scripts, and installation scripts

adv-r

Advanced R programming: a book

agricultural_plants

A deck of flashcards for learning about agricultural plants

alignreads

A wrapper for YASRA and associated parsing scripts

asap

A scalable bacterial genome assembly, annotation and analysis pipeline

assignments

bactopia

A flexible pipeline for complete analysis of bacterial genomes

beaverdown

An updated R Markdown thesis template using the bookdown package

bioinformatics_practice

biostrings

Efficient manipulation of biological strings

botany

A deck of flashcards for botany. For use with the "flashcards" R package

bugtest

A reprex

cdc_svi_coding_practice

Test repo for teaching

cli

Tools for making beautiful & useful command line interfaces

clipboard-image.nvim

Neovim Lua plugin to paste image from clipboard.

configuration

Configuration files that go in my home directory for the program I use

culture_collection

A Drupal module that runs the Grunwald Lab culture collection

dada2

Accurate sample inference from amplicon data with single nucleotide resolution

data_science_crashcourse

deseq2

Differential gene expression analysis based on the negative binomial distribution

dplyr

Dplyr: A grammar of data manipulation

effectr-1

An R package to call oomycete effectors

fieldguide

An nascent R package for creating field guides for a given location

flashcards

An R pacakge for creating and practicing digital flashcards

funguild

FUNGuild: parsing OTUs into functional guilds

ggrepel

:round_pushpin: Repel overlapping text labels away from each other.

glossary

An R packge to add and link to a glossary in Rmarkdown-based websites

graphtyper_workflow_test

Just a test to help me learn nextflow

hardcore-sk

Rimworld Hardcore SK project, our portal:

hilldiv

Diversity analysis based on Hill numbers