Comments (3)
biochem-fan
commented on May 27, 2024
UserWarning
This is a warning, not an error. Did the job crash after printing it out? Didn't you see other messages?
from relion.
JJJanelia
commented on May 27, 2024
Hi, thanks for kindly looking into this.
Yes, the job crashed right after. These were immediately above the warning message above:
/home/[email protected]/miniconda3/envs/relion-5.0/lib/python3.10/site-packages/dynamight/deformable_backprojection/backprojection_utils.py:128: UserWarning: Using padding='same' with even kernel lengths and odd dilation may require a zero-padded copy of the input be created (Triggered internally at ../aten/src/ATen/native/Convolution.cpp:1003.)
sm_bin_mask = torch.nn.functional.conv3d(bin_mask.unsqueeze(0).unsqueeze(0),
/home/[email protected]/miniconda3/envs/relion-5.0/lib/python3.10/site-packages/torch/functional.py:504:
from relion.
JJJanelia
commented on May 27, 2024
Any help on this would be very much appreciated!
from relion.
Related Issues (20)
- motioncor2 only works properly up to a version 1.5.0 in relion-5.0b (commit 70875e) HOT 1
- RELION behaves like there is GPU sharing in Refine3D jobs when used on a slurm cluster causing VRAM errors HOT 8
- ERROR: CudaCustomAllocator out of memory in SPA using Relion 5.0-beta-0-commit-90d239 HOT 1
- Error when building relion with many recent commits that changed CMakeLists HOT 3
- Segmentation fault in 3D classification in relion HOT 5
- tomo name error if the name starts with a 0 in TS alignment Relion5 HOT 7
- failed to create cufft plan HOT 3
- No option to correct CTF during ReconstructTomograms in Relion5 GUI HOT 8
- Relion5 build : Could NOT find Torch home directory for Conda env HOT 1
- Issue with CTF estimation, RELION tries to convert particles even though they are in the right format HOT 1
- Crash with relion and GPU HOT 2
- Multibody refinement initial offset search parameters are multiplied by an extra factor of pixel size
- stack numbering not updated in relion_image_handler
- Relion5.0 tomo HOT 7
- CTFFIND5 support HOT 6
- Gain ref different size than tifs HOT 3
- Cannot SIZE object 50 because it does not exist
- Error running blush refinement HOT 2
- DynaMight missing python modul HOT 10
- How to get blush model wieght installed and sourced in a location accessible to all? HOT 1
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from relion.