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Basic minc-tools from former minc repository
License: Other
This project forked from bic-mni/minc-tools
Basic minc-tools from former minc repository
License: Other
MINC Tools This package is a collection of tools that work on MINC format images. * rawtominc, minctoraw, mincextract - format conversion * mincheader, mincdiff, mincinfo, minchistory - file information * mincedit, minc_modify_header - header manipulation * mincresample - arbitrary volume resampling * mincreshape - extraction of volume sub-cubes, image flipping, dimension re-ordering, type conversion * mincconcat - concatenating or interleaving images from multiple files * mincmath - perform simple math on files * minccalc - perform more complicated math on files through an expression * mincaverage - average minc files * mincstats - calculate statistics across voxels of a file * minclookup - lookup table operations for arbitrary re-mappings of intensities * worldtovoxel, voxeltoworld - coordinate conversion * xfmconcat, xfminvert - generalized transformation utilities * mincview - simple image display using xv or ImageMagick * mincpik - generate picture from slice through volume INSTALLATION Compilation and installation is now done with CMake. Use these steps: 1. Compile $ cmake CMakeLists.txt $ make Note that if you have installed libminc in a non-standard location (in this case /opt/local/minc) you will have to tell CMake where to find it as such: $ export LIBMINC_DIR=/opt/local/minc $ cmake CMakeLists.txt $ make Similarly if you'd like to install minc-tools in this same location you will need to do this: $ export LIBMINC_DIR=/opt/local/minc $ cmake -DCMAKE_INSTALL_PREFIX:PATH=/opt/local/minc CMakeLists.txt $ make 2. Install $ sudo make install
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