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brainlife

Free cloud platform for secure neuroscience data analysis.

brainlife-apps-stats

brainlife-related-scripts

bsc_mergefgandclass

concussion

Processing pipeline for Concussion neuroimaging projects performed at Indiana University

convert-func-nii

dashboards

data-science-learning

datalad-osf

Utility scripts to facilitate use of Datalad with OSF

dipy

DIPY is the paragon 3D/4D+ imaging library in Python. Contains generic methods for spatial normalization, signal processing, machine learning, statistical analysis and visualization of medical images. Additionally, it contains specialized methods for computational anatomy including diffusion, perfusion and structural imaging.

dmri-normalize-bvectors

docker-fsl

FSL docker container for Brainlife use

dockerfiles

repository to store various dockerfiles used to build docker containers that are used across multiple brainlife apps

docs

Brainlife.io Documentation

educational-notebooks

faskowitz2018wsbmlifespan

fds-courseone

Foundations of Psychological Data Science I

fds-courseone-extra-laterality

This repository is intended to be used in combination with https://github.com/psychdatascience/FDS-CourseOne. This repository contains a dataframe ('tractmeasures.csv') containing the macro- and micro-structural statistics for 61 white matter tracts across multiple data sources.

ga-launcher

Group Analysis container Launcher (experimental)

ga-test

ipython notebook for brainlife group analysis

github-related-functions

hydejack-starter-kit

A quicker, cleaner way to get started blogging with Hydejack.

irf-transfer-convert-upload

lap_tract_segmentation

Code for automatic segmentation of tract/bundles from tractography data based on the linear assignment problem (LAP).

life_scripts

Diffusion imaging and tractograpy script sin MatLab

lyricsgenius

Download song lyrics and metadata from Genius.com 🎶🎤

mba

Matlab Brain Anatomy. This is a set of routines for displaying and manipulating brain anatomy using MatLab.

mricron

Simple medical imaging visualization tool designed for NIfTI images. Includes dcm2nii for conversion of DICOM, Philips, and other proprietary formats.

nickengmann.github.io

Personal Website

nigerian_brain_analyses