Summer 2014 project for drug-target pathway analysis
This project aims to reveal the relationships among drug-gene-protein chain reactions by examining multiple databases. This project is a part of Dr. Xie's project, about drug development.
At this point (14 Sep. 2014) the databases are: DrugBank - http://www.drugbank.ca/ Connectivity Map - https://www.broadinstitute.org/cmap/ STITCH - http://stitch.embl.de/ String - http://string-db.org/
Additional databases and uses are: PubChem - methods in PUGREST.pm access PubChem to get the InChIKeys for drugs UniProt - Conversions from ENSP IDs to UniProtKB are based on UniProt ID map data
Note: This repository is for Hansaim Lim's project.